No-extinction targets are destined to fail

21 09 2012

I’ve been meaning to write about this for a while, and now finally I have been given the opportunity to put my ideas ‘down on paper’ (seems like a bit of an old-fashioned expression these days). Now this post might strike some as overly parochial because it concerns the state in which I live, but the concept applies to every jurisdiction that passes laws designed to protect biodiversity. So please look beyond my navel and place the example within your own specific context.

As CB readers will appreciate, I am firmly in support of the application of conservation triage – that is, the intelligent, objective and realistic way of attributing finite resources to minimise extinctions for the greatest number of (‘important’) species. Note that deciding which species are ‘important’ is the only fly in the unguent here, with ‘importance’ being defined inter alia as having a large range (to encompass many other species simultaneously), having an important ecological function or ecosystem service, representing rare genotypes, or being iconic (such that people become interested in investing to offset extinction.

But without getting into the specifics of triage per se, a related issue is how we set environmental policy targets. While it’s a lovely, utopian pipe dream that somehow our consumptive 7-billion-and-growing human population will somehow retract its massive ecological footprint and be able to save all species from extinction, we all know that this is irrevocably  fantastical.

So when legislation is passed that is clearly unattainable, why do we accept it as realistic? My case in point is South Australia’s ‘No Species Loss Strategy‘ (you can download the entire 7.3 Mb document here) that aims to

“…lose no more species in South Australia, whether they be on land, in rivers, creeks, lakes and estuaries or in the sea.”

When I first learned of the Strategy, I instantly thought to myself that while the aims are laudable, and many of the actions proposed are good ones, the entire policy is rendered toothless by the small issue of being impossible. Read the rest of this entry »





Conservation catastrophes

22 02 2012

David Reed

The title of this post serves two functions: (1) to introduce the concept of ecological catastrophes in population viability modelling, and (2) to acknowledge the passing of the bloke who came up with a clever way of dealing with that uncertainty.

I’ll start with latter first. It came to my attention late last year that a fellow conservation biologist colleague, Dr. David Reed, died unexpectedly from congestive heart failure. I did not really mourn his passing, for I had never met him in person (I believe it is disingenuous, discourteous, and slightly egocentric to mourn someone who you do not really know personally – but that’s just my opinion), but I did think at the time that the conservation community had lost another clever progenitor of good conservation science. As many CB readers already know, we lost a great conservation thinker and doer last year, Professor Navjot Sodhi (and that, I did take personally). Coincidentally, both Navjot and David died at about the same age (49 and 48, respectively). I hope that the being in one’s late 40s isn’t particularly presaged for people in my line of business!

My friend, colleague and lab co-director, Professor Barry Brook, did, however, work a little with David, and together they published some pretty cool stuff (see References below). David was particularly good at looking for cross-taxa generalities in conservation phenomena, such as minimum viable population sizes, effects of inbreeding depression, applications of population viability analysis and extinction risk. But more on some of that below. Read the rest of this entry »





Not magic, but necessary

18 10 2011

In April this year, some American colleagues of ours wrote a rather detailed, 10-page article in Trends in Ecology and Evolution that attacked our concept of generalizing minimum viable population (MVP) size estimates among species. Steve Beissinger of the University of California at Berkeley, one of the paper’s co-authors, has been a particularly vocal adversary of some of the applications of population viability analysis and its child, MVP size, for many years. While there was some interesting points raised in their review, their arguments largely lacked any real punch, and they essentially ended up agreeing with us.

Let me explain. Today, our response to that critique was published online in the same journal: Minimum viable population size: not magic, but necessary. I want to take some time here to summarise the main points of contention and our rebuttal.

But first, let’s recap what we have been arguing all along in several papers over the last few years (i.e., Brook et al. 2006; Traill et al. 2007, 2010; Clements et al. 2011) – a minimum viable population size is the point at which a declining population becomes a small population (sensu Caughley 1994). In other words, it’s the point at which a population becomes susceptible to random (stochastic) events that wouldn’t otherwise matter for a small population.

Consider the great auk (Pinguinus impennis), a formerly widespread and abundant North Atlantic species that was reduced by intensive hunting throughout its range. How did it eventually go extinct? The last remaining population blew up in a volcanic explosion off the coast of Iceland (Halliday 1978). Had the population been large, the small dent in the population due to the loss of those individuals would have been irrelevant.

But what is ‘large’? The empirical evidence, as we’ve pointed out time and time again, is that large = thousands, not hundreds, of individuals.

So this is why we advocate that conservation targets should aim to keep at or recover to the thousands mark. Less than that, and you’re playing Russian roulette with a species’ existence. Read the rest of this entry »





Little left to lose: deforestation history of Australia

6 10 2011

© donkeycart http://ow.ly/6OSeX

I don’t usually do this, but I’m going to blog about a paper I’ve just had accepted in the Journal of Plant Ecology that isn’t yet out online. The reason for the early post is that the paper itself won’t appear until 2012 in a special issue of the journal, and I think the information needs to get out there.

First, a little history – In May this year I blogged about a workshop that I attended at Sun Yat-Sen University in Guangzhou, China at the behest of Fangliang He. The workshop (International Symposium for Biodiversity and Theoretical Ecology) was attended by big-wig overseas ecologists and local talent, and was not only informative, but a lot of fun (apart from the slight headache on the way home from a little too much báijiǔ the night before). More importantly, we  lǎo wài (老外) were paired with various students to assist with publications in progress, and I’m happy to say that for me, two of those have already produced fruit (one paper in review, another about to be submitted).

But the real reason for this post was the special issue of papers written by the invitees – I haven’t published in the journal before, and understand that it is a Chinese journal that has gone mainstream internationally now. I’m only happy to contribute to lifting its profile.

Given that I’m not a plant ecologist per se (although I’ve dabbled), I decided to write a review-like paper that I’ve been meaning to put together for some time now examining the state of Australia’s forests and the history of her deforestation and forest degradation. The reason I thought this was needed is that there is no single peer-reviewed resource one can turn to for a concise synopsis of the history of our country’s forest destruction. The stats are out there, but they’re buried in books, government reports and local-scale scientific papers. My hope is that my paper will be used as a general reference point for people wishing to get up to speed with Australia’s deforestation history.

The paper is entitled Little left to lose: deforestation and forest degradation in Australia since European colonisation, and it describes the general trends in forest loss and degradation Australia-wide, followed by state- and territory-level assessments. I’ve also included sections on plantations, biodiversity loss from deforestation and fragmentation, the feedback loop between climate change and deforestation, the history of forest protection legislation, and finally, a discussion of the necessary general policy directions needed for the country’s forests.

I’ve given a few titbits of the stats in a previous post, but let me just summarise some of the salient features here: Read the rest of this entry »





Life, death and Linneaus

9 07 2011

Barry Brook (left) and Lian Pin Koh (right) attacking Fangliang He (centre). © CJA Bradshaw

I’m sitting in the Brisbane airport contemplating how best to describe the last week. If you’ve been following my tweets, you’ll know that I’ve been sequestered in a room with 8 other academics trying to figure out the best ways to estimate the severity of the Anthropocene extinction crisis. Seems like a pretty straight forward task. We know biodiversity in general isn’t doing so well thanks to the 7 billion Homo sapiens on the planet (hence, the Anthropo prefix) - the question though is: how bad?

I blogged back in March that a group of us were awarded a fully funded series of workshops to address that question by the Australian Centre for Ecological Synthesis and Analysis (a Terrestrial Ecosystem Research Network facility based at the University of Queensland), and so I am essentially updating you on the progress of the first workshop.

Before I summarise our achievements (and achieve, we did), I just want to describe the venue. Instead of our standard, boring, windowless room in some non-descript building on campus, ACEAS Director, Associate Professor Alison Specht, had the brilliant idea of putting us out away from it all on a beautiful nature-conservation estate on the north coast of New South Wales.

What a beautiful place – Linneaus Estate is a 111-ha property just a few kilometres north of Lennox Head (about 30 minutes by car south of Byron Bay) whose mission is to provide a sustainable living area (for a very lucky few) while protecting and restoring some pretty amazing coastal habitat along an otherwise well-developed bit of Australian coastline. And yes, it’s named after Carl Linnaeus. Read the rest of this entry »





Over-estimating extinction rates

19 05 2011

I meant to get this out yesterday, but was too hamstrung with other commitments. Now the media circus has beat me to the punch. Despite the lateness (in news-time) of my post, my familiarity with the analysis and the people involved gives me a unique insight, I believe.

So a couple of months ago, Fangliang He and I were talking about some new analysis he was working on where he was testing the assumption that back-casted species-area relationships (SAR) gave reasonable estimates of inferred extinction rates. Well, that paper has just been published in today’s issue of Nature  by Fangliang He and Stephen Hubbell entitled: Species–area relationships always overestimate extinction rates from habitat loss (see also the News & Views piece by Carsten Rahbek and Rob Colwell).

The paper has already stirred up something of a controversy before the ink has barely had time to dry. Predictably, noted conservation biologists like Stuart Pimm and Michael Rosenzweig have already jumped down Fangliang’s throat.

Extinction rates of modern biota in the current biodiversity crisis (Ehrlich & Pringle 2008) are wildly imprecise. Indeed, it has been proposed that extinction rates exceed the deep-time average background rate by 100- to 10000-fold (Lawton & May 2008; May et al. 1995; Pimm & Raven 2000), and no rigorously quantification of these rates globally has ever been accomplished (although there are several taxon- and region-specific estimates of localised extinction rates (Brook et al. 2003; Regan et al. 2001; Hambler et al. 2011; Shaw 2005).

Much of the information used to infer past extinction rate estimates is based on  the species-area relationship (e.g., Brook et al. 2003); this method estimates extinction rates by reversing the species-area accumulation curve, extrapolating backward to smaller areas to calculate expected species loss. The concept is relatively simple, even though the underlying mathematics might not be. Read the rest of this entry »





Species’ Ability to Forestall Extinction – AudioBoo

8 04 2011

Here’s a little interview I just did on the SAFE index with ABC AM:


Not a bad job, really.

And here’s another one from Radio New Zealand:


CJA Bradshaw





How fast are we losing species anyway?

28 03 2011

© W. Laurance

I’ve indicated over the last few weeks on Twitter that a group of us were recently awarded funding from the Australian Centre for Ecological Synthesis and Analysis – ACEAS – (much like the US version of the same thing – NCEAS) to run a series of analytical workshops to estimate, with a little more precision and less bias than has been done previously, the extinction rates of today’s biota relative to deep-time extinctions.

So what’s the issue? The Earth’s impressive diversity of life has experienced at least five mass extinction events over geological time. Species’ extinctions have kept pace with evolution, with more than 99 % of all species that have ever existed now gone (Bradshaw & Brook 2009). Despite general consensus that biodiversity has entered the sixth mass extinction event because of human-driven degradation of the planet, estimated extinction rates remain highly imprecise (from 100s to 10000s times background rates). This arises partly because the total number of species is unknown for many groups, and most extinctions go unnoticed.

So how are we going to improve on our highly imprecise estimates? One way is to look at the species-area relationship (SAR), which to estimate extinction requires one to extrapolate back to the origin in taxon- and region-specific SARs (e.g., with a time series of deforestation, one can estimate how many species would have been lost if we know how species diversity changes in relation to habitat area). Read the rest of this entry »





Classics: demography versus genetics

16 03 2011

Here’s another short, but sweet Conservation Classic highlighted in our upcoming book chapter (see previous entries on this book). Today’s entry comes from long-time quantitative ecology guru, Russ Lande, who is now based at the Silwood Park Campus (Imperial College London).

© IBL

In an influential review, Lande (1988) argued that

“…demography may usually be of more immediate importance than population genetics in determining the minimum viable size of wild populations”.

It was a well-reasoned case, and was widely interpreted to mean that demographic and ecological threats would provide the ‘killer blow’ to threatened species before genetic factors such as inbreeding and fitness effects of loss of genetic diversity had time to exert a major influence on small population dynamics.

Read the rest of this entry »





S.A.F.E. = Species Ability to Forestall Extinction

8 01 2011

Note: I’ve just rehashed this post (30/03/2011) because the paper is now available online (see comment stream). Stay tuned for the media release next week. – CJAB

I’ve been more or less underground for the last 3 weeks. It has been a wonderful break (mostly) from the normally hectic pace of academic life. Thanks for all those who remain despite the recent silence.

© Ezprezzo.com

But I’m back now with a post about a paper we’ve just had accepted in Frontiers in Ecology and Environment. In my opinion it’s a leap forward in how we measure relative threat risk among species, despite some criticism.

I’ve written in past posts about the ‘magic’ minimum number of individuals that should be in a population to reduce the chance of extinction from random events. The so-called ‘minimum viable population (MVP) size’ is basically the abundance of a (connected) population below which random events take over from factors causing sustained declines (Caughley’s distinction between the ‘declining’ and ‘small’ population paradigms).

Up until the last few years, the MVP size was considered to be a population- or species-specific value, and it required very detailed demographic, genetic and biogeographical data to estimate – not something that biologists tend to have at their fingertips for most high-risk species. However, several papers published by our group (Minimum viable population size and global extinction risk are unrelated, Minimum viable population size: a meta-analysis of 30 years of published estimates and Pragmatic population viability targets in a rapidly changing world) have shown that there is in fact little variation in this number among the best-studied species; both demographic and genetic data support a number of around 5000 to avoid crossing the deadly threshold.

Now the fourth paper in this series has just been accepted (sorry, no link yet, but I’ll let you all know as soon as it is available), and it was organised and led by Reuben Clements, and co-written by me, Barry Brook and Bill Laurance.

The idea is fairly simple and it somewhat amazes me that it hasn’t been implemented before. The SAFE (Species Ability to Forestall Extinction) index is simply the distance a population is (in terms of abundance) from its MVP. In the absence of a species-specific value, we used the 5000-individual threshold. Thus, Read the rest of this entry »





Why and how did Pleistocene megafauna go extinct?

27 05 2010

Just a quick post to say that I’m currently at Duke University in the USA attending a special National Evolutionary Synthesis Centre ‘Catalysis Meeting’ entitled: Integrating datasets to investigate megafaunal extinction in the Late Quaternary.

The meeting is basically about nailing down some of the remaining mysteries and controversies surrounding the extinction of many species during periods of rapid climate change 11-60 thousand years ago.

It’s been fun so far, and a lot of exciting analysis will ensue, but for the meantime I’ll just summarise what we’re trying to do. Read the rest of this entry »





The biodiversity extinction numbers game

4 01 2010

© Ferahgo the Assassin

Not an easy task, measuring extinction. For the most part, we must use techniques to estimate extinction rates because, well, it’s just bloody difficult to observe when (and where) the last few individuals in a population finally kark it. Even Fagan & Holmes’ exhaustive search of extinction time series only came up with 12 populations – not really a lot to go on. It’s also nearly impossible to observe species going extinct if they haven’t even been identified yet (and yes, probably still the majority of the world’s species – mainly small, microscopic or subsurface species – have yet to be identified).

So conservation biologists do other things to get a handle on the rates, relying mainly on the species-area relationship (SAR), projecting from threatened species lists, modelling co-extinctions (if a ‘host’ species goes extinct, then its obligate symbiont must also) or projecting declining species distributions from climate envelope models.

But of course, these are all estimates and difficult to validate. Enter a nice little review article recently published online in Biodiversity and Conservation by Nigel Stork entitled Re-assessing current extinction rates which looks at the state of the art and how the predictions mesh with the empirical data. Suffice it to say, there is a mismatch.

Stork writes that the ‘average’ estimate of losing about 100 species per day has hardly any empirical support (not surprising); only about 1200 extinctions have been recorded in the last 400 years. So why is this the case?

As mentioned above, it’s difficult to observe true extinction because of the sampling issue (the rarer the individuals, the more difficult it is to find them). He does cite some other problems too – the ‘living dead‘ concept where species linger on for decades, perhaps longer, even though their essential habitat has been destroyed, forest regrowth buffering some species that would have otherwise been predicted to go extinct under SAR models, and differing extinction proneness among species (I’ve blogged on this before).

Of course, we could just all be just a pack of doomsday wankers vainly predicting the end of the world ;-)

Well, I think not – if anything, Stork concludes that it’s all probably worse than we currently predict because of extinction synergies (see previous post about this concept) and the mounting impact of rapid global climate change. If anything, the “100 species/day” estimate could look like a utopian ideal in a few hundred years. I do disagree with Stork on one issue though – he claims that deforestation isn’t probably as bad as we make it out. I’d say the opposite (see here, here & here) – we know so little of how tropical forests in particular function that I dare say we’ve only just started measuring the tip of the iceberg.

CJA Bradshaw

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This post was chosen as an Editor's Selection for ResearchBlogging.org

ResearchBlogging.orgStork, N. (2009). Re-assessing current extinction rates Biodiversity and Conservation DOI: 10.1007/s10531-009-9761-9





Conservation Scholars: Barry Brook

7 04 2009

The Conservation Scholars series continues with conservation biologists that were not highlighted in our book Tropical Conservation Biology (where we produced a series of ‘Spotlights’ describing the contributions of great thinkers in conservation science). Each highlight of a Conservation Scholar includes a small biography, a list of major scientific publications and a Q & A on the person’s particular area of expertise.

Another good friend and colleague, Barry Brook, is our twelfth Conservation Scholar…

Biography

Barry Brook (right) talking with Frank Fenner at the Australian Academy of Science.

Barry Brook (right) talking with Frank Fenner at the Australian Academy of Science.

Professor Barry W. Brook holds the Foundation Sir Hubert Wilkins Chair of Climate Change and is Director of Climate Science at the University of Adelaide‘s Environment Institute. He has published two books and over 140 peer-reviewed scientific papers, and regularly writes opinion pieces and popular articles for the media. In 2006, he was awarded the Australian Academy of Science Fenner Medal for distinguished research in biology and the Edgeworth David Medal by the Royal Society of New South Wales, and in 2007, the H.G. Andrewartha Medal by the Royal Society of South Australia and was listed by Cosmos as one of Australia’s top 10 young scientists. His area of expertise is climate change, global change biology, and the synergies between different human impacts on biodiversity. Specific topics include analytical and computer simulation modelling for risk assessment of climate change impacts, understanding the relevance of past extinctions to the present biodiversity crisis, tropical conservation, and wildlife population management. His research methods focus primarily on the statistical analysis, interpretation and computational modelling of long-term data, and meta-analysis of large-scale databases. Scenarios for future impacts are modelled at global, regional and local scales, to provide a robust scientific underpinning for scientific management and government policy. His current work is aimed at determining the extent to which climate change might amplify other major anthropogenic threats to biodiversity (e.g., demographic and genetic stress, habitat degradation, introduced predator and competitor species), and developing new modelling systems which realistically captures this information and so can be used for the purposes of prediction, adaptation and ecosystem management and restoration. Effective communication of the science of climate change is fundamental to providing policy makers with the type of evidence required to institute meaningful mitigation policy and to understand available adaptation options. It is this imperative that has motivated Barry to take an active leadership role in the communication of the science of global change to government, industry and the community (directly, via public lectures and workshops and advisory committees, and indirectly via television, radio, the print media and popular science articles). It is his strong belief that presenting hard-won technical scientific evidence to a broad audience in an intelligible way is the surest path to provoking meaningful societal change towards long-term sustainability.

Major Publications

Questions and Answers

1. What do you believe is the most pressing biodiversity conservation problem we need to address as a society today?

Active intervention and triage. Global factors (climate warming, land use change, invasive species, environmental pollution) are the primary drivers of the current biodiversity crisis, and as such, solutions that don’t see ‘the big picture’ are doomed to fail. In the past, we’ve taken a ‘reserve-and-isolate’ approach to conservation (e.g., create protected areas and then exclude people). We’ve also focused predominantly on the problems facing individual threatened species. This will not work on the scales required for 21st century conservation biology. As species distributions shift and whole communities of interacting organisms are damaged by these overarching threats, we are going to have to face two challenging prospects: (i) we’ll need to move many species ourselves rather than simply hoping for them to disperse to new areas of their own accord, and (ii) we’ll need to give up on many of the most-vulnerable species in order to save most of the rest. We are not going to avoid extinctions – but can possibly still avoid a mass extinction.

2. How did you make the change from pure theoretical ecologist to climate change specialist?

I’m not sure I ever really made a change (certainly not a switch). Scientific careers naturally evolve as one’s research interests take different directions. I’ve always been interested in numerical modelling, synergies in complex systems and the emergent properties that result, and treatment of risk and uncertainty. Whether it be theoretical ecology, palaeobiology, or contemporary climate change impacts – it’s all ‘systems science’. Certainly climate change is an overarching threat, potentially the most damaging of all, and so is always in the mix when considering future scenarios of biodiversity and societal responses. Energy, land use, human values – they’re all intrinsic parts of the big picture in which conservation must operate.

3. You’ve done a lot of work predicting species extinction trends – what are some of the principal take-home messages about extinctions and how to prevent (reduce) them?

Species start out rare, and end their existence rare – it’s fundamental to evolution [I guess phyletic transformations are the exception to the former, but the latter is universal]. In between – during most of a species’ lifetime (of typically 1 to 10 million years) – most species are fairly abundant (locally or regionally). So extinction dynamics is the science of understanding how abundant things become rare. There are interesting theoretical properties of small populations that are close to extinction, which make them fun to study, but the business end of conservation is on the decline phase. More abundant populations and those species with populations in multiple locations are harder to knock out. As are genetically diverse populations, and those with wide ranges. ‘Geographical insurance’ should not be underestimated as a conservation tool. If you want to prevent extinctions, you must work hardest at preventing excessive and widespread declines in abundance, and in maintaining viable populations that are resilient to short-term environmental variation. The rest is detail – and much of it theoretically interesting but not particularly relevant to preventing mass extinction.

4. What skill(s) do you believe is(are) most important for burgeoning conservation biologists to master?

Pragmatism, numerical aptitude, and literacy. Pragmatism because you must realise that not everything can be saved (or studied) and that natural laws are not up for negotiation. Numerical skills because all scientists should be modellers (a hypothesis is a verbal model), and sensible integration of data streams into a meaningful ‘signal’ (whilst acknowledging uncertainty) is the most fundamental step in driving scientific progress. We’re all jigsaw builders, but we haven’t got the final picture to look at and haven’t got the time or resources  just to jam pieces together randomly. Literacy because if scientists can’t communicate their work, then it is of no practical value. There are a lot of embedded traditions in scientific writing that have no place in modern communication.

5. What’s your philosophy on statistical support for ‘evidence’ of effects in conservation biology?

From a holistic perspective, full reality is, and always will be, unknowable. For reasons of convenience and practicality, we leave most minor things out. Science is about identifying the main factors required to summarise a system of interest, whilst looking out for unusual boundary effects. Evidence is therefore about quantifying effect size, especially the relative important of different effects. Statistics is all about getting a handle on the uncertainty in your estimates of effect size. Issues of power and variability are important considerations here, as are appropriate methods of model construction, selection, simplification and inference. Binary concepts such as whether a result is ‘significant’ (or not), or methods of multivariate ‘data dredging’ in which an investigator is led by the data rather than being driven by a priori hypotheses, are ultimately pretty meaningless.

CJA Bradshaw

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Cloning for conservation – stupid and wasteful

5 02 2009
© J. F. Jaramillo

© J. F. Jaramillo

I couldn’t have invented a better example of a Toothless conservation concept.

I just saw an article in the Independent (UK) about cloning for conservation that has rehashed the old idea yet again – while there was some interesting thoughts discussed, let’s just be clear just how stupidly inappropriate and wasteful the mere concept of cloning for biodiversity conservation really is.

1. Never mind the incredible inefficiency, the lack of success to date and the welfare issues of bringing something into existence only to suffer a short and likely painful life, the principal reason we should not even consider the technology from a conservation perspective (I have no problem considering it for other uses if developed responsibly) is that you are not addressing the real problem – mainly, the reason for extinction/endangerment in the first place. Even if you could address all the other problems (see below), if you’ve got no place to put these new individuals, the effort and money expended is an utter waste of time and money. Habitat loss is THE principal driver of extinction and endangerment. If we don’t stop and reverse this now, all other avenues are effectively closed. Cloning won’t create new forests or coral reefs, for example.

I may as well stop here, because all other arguments are minor in comparison to (1), but let’s continue just to show how many different layers of stupidity envelop this issue.

2. The loss of genetic diversity leading to inbreeding depression is a major issue that cloning cannot even begin to address. Without sufficient genetic variability, a population is almost certainly more susceptible to disease, reductions in fitness, weather extremes and over-exploitation. A paper published a few years ago by Spielman and colleagues (Most species are not driven to extinction before genetic factors impact them) showed convincingly that genetic diversity is lower in threatened than in comparable non-threatened species, and there is growing evidence on how serious Allee effects are in determining extinction risk. Populations need to number in the 1000s of genetically distinct individuals to have any chance of persisting. To postulate, even for a moment, that cloning can artificially recreate genetic diversity essential for population persistence is stupidly arrogant and irresponsible.

3. The cost. Cloning is an incredibly costly business – upwards of several millions of dollars for a single animal (see example here). Like the costs associated with most captive breeding programmes, this is a ridiculous waste of finite funds (all in the name of fabricated ‘conservation’). Think of what we could do with that money for real conservation and restoration efforts (buying conservation easements, securing rain forest property, habitat restoration, etc.). Even if we get the costs down over time, cloning will ALWAYS be more expensive than the equivalent investment in habitat restoration and protection. It’s wasteful and irresponsible to consider it otherwise.

So, if you ever read another painfully naïve article about the pros and cons of cloning endangered species, remember the above three points. I’m appalled that this continues to be taken seriously!

CJA Bradshaw

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Conservation Scholars: Navjot Sodhi

3 02 2009

The Conservation Scholars series continues now with conservation biologists that were not highlighted in our book Tropical Conservation Biology (where we produced a series of ‘Spotlights’ describing the contributions of great thinkers in conservation science). Each highlight of a Conservation Scholar includes a small biography, a list of major scientific publications and a Q & A on the person’s particular area of expertise.

I thought I’d start this new batch with one of my good friends and colleagues, Navjot Sodhi. He is our eleventh Conservation Scholar…

Biography

I am currently Professor of Conservation Ecology at the National University of Singapore. I received my PhD from the University of Saskatchewan (Canada), and I have been studying the effects of rain forest loss and degradation on Southeast Asian fauna and flora for over the last 13 years. I have published over 100 scientific papers in international and regional scientific journals such as Nature, Science, Trends in Ecology and Evolution, Annual Review of Ecology, Evolution and Systematics, Auk, Current Biology, BioScience, Ecological Applications, Journal of Applied Ecology, Conservation Biology, Biological Conservation, and Biodiversity and Conservation. I have written/edited several books/monographs such as Southeast Asian Biodiversity in Crisis (2006, Cambridge University Press), Winged Invaders: ‘Pest’ birds of Asia-Pacific (2006, SNP, Singapore), Tropical Conservation Biology (2007, Blackwell) and Biodiversity and Human Livelihoods in Protected Areas: case studies from the Malay Archipelago (2008, Cambridge University Press), and I am currently co-editing a textbook called Conservation Biology  for All (2009, Oxford University Press).  I have also spent time at Harvard University as a Bullard Fellow (2001-02) and Hrdy Fellow (2008-09) where I now hold an adjunct associate position. I am (or have been) an Associate Editor/Editor of prestigious journals such as Conservation Biology, Biological Conservation, Animal Conservation, the Auk and Biotropica. Read the rest of this entry »





Conservation Scholars: Stuart Pimm

5 01 2009

This series on ConservationBytes.com takes a page out of our book Tropical Conservation Biology (Sodhi, Brook & Bradshaw) – therein we produced a series of ‘Spotlights’ describing the contributions of great thinkers to conservation science. Each highlight of a Conservation Scholar includes a small biography, a list of major scientific publications and a Q & A on the person’s particular area of expertise.

Our ninth Conservation Scholar is Stuart Pimm

Biography

I am the Doris Duke Professor of Conservation Ecology at the School of the Environment at Duke University and have a secondary appointment of Extraordinary Professor at the Conservation Ecology Research Unit at the University of Pretoria, South Africa. My interests are endangered species conservation, biodiversity, species extinction, and habitat loss. I’m the author of over 200 scientific publications, many of them in Nature and Science, and have written four books, the most recent being the critically acclaimed World According to Pimm: a Scientist Audits the Earth. In 2006, Prince Willem-Alexander presented me the Dr. A.H. Heineken Prize for Environmental Sciences on behalf of the Royal Netherlands Academy of Arts and Sciences. How did all this happen?

Like many peers, I started out as a naturalist during my adolescence, read zoology at university, and then did a PhD in ecology. Unlike others, I worked in Hawai’i soon afterwards where I was deeply shaken by the total absence of many of the birds I expected to see – they were either extinct or close to it. I was curious about why some species succumbed while other survived. Importantly, these losses were an outrage. Scientists, I realized, could help prevent extinctions. Vitally, they had an obligation to do so. Thereafter, my research group has sought out the species and ecosystems that are in most urgent need of protection. That work takes us to the Everglades, the Amazon and the coastal forests of Brazil, to southern Africa, and to Madagascar. We work with local organisations and governments to provide the best possible advice to solving conservation problems. We’re problem driven and that means we develop whatever skills are needed to their solution. We’ve always had good quantitative skills, but in addition, my group members all use geographic information system and analyses of satellite imagery – skills we developed only in the last decade. And yes, some of the solutions come from sharing our knowledge with politicians and advising on policy issues.

Major Publications

Questions and Answers

1. The current biodiversity crisis has been termed the “sixth extinction”; an allusion to the five largest mass die-offs in Earth’s past. Is this comparison justified?

In the previous five die-offs – the last killed off the dinosaurs – more than half the variety of life disappeared. It took roughly ten million years to recover the former numbers of species. Human actions in the last thousand years have probably wiped out about 10 % of species, while actions in the last century have threatened at least 10 % of the remainder. By threatened, I mean that expert opinion judges that these species will become extinct in the next few decades if we do nothing to protect them. It gets worse. Tropical forests hold perhaps two-thirds of all species on land and tropical oceans, especially coral reefs, the great majority of marine species. If current trends continue, human actions will so massively reduce these ecosystems that a third or more of the remaining species will be on a path to extinction within a few decades.

2. How reliable are biogeographic proxies such as the species-area relationship for inferring extinction rates?

Our ability to predict future trends on land comes from the species-area relationship. It’s one of the great ecological laws – that is, a commonly observed pattern across different species groups in different areas. An oceanic island, half the size of larger island, will have about 15 % fewer species according to this law. Imagine we convert what was once a continuous forest – say, eastern North America – into islands of about half the forest cover. There are about 30 species of bird endemic to the forests of the region, so we’d expect to lose 4.5 species. And, indeed, four species of bird became extinct as eastern North America lost its forests in the four centuries since European colonisation – and another species in threatened with extinction! Detailed calculations like this one have now been done on many areas of tropical forest, which often contain hundreds of endemic species. The numbers of species the model predicts to go extinct and those that have done so are very similar (or are presently in danger of doing so, for extinctions take time to happen.). These excellent calibrations of the law mean that we can predict how many species will go extinct if we reduce tropical forests further.

3. How can scientists most effectively engage the often pseudo-scientific arguments posed by environmental ‘sceptics’, who claim global hazards, such as the large-scale death of species and climate change, are illusory or inconsequential?

The most effective strategy is not to engage the sceptics. I’m for honest scientific debate – it’s what I do every day. The evidence for global change and massive loss of species is unassailable, however. Sceptics ignore the evidence, usually in my experience, because they are paid to do so. There is nothing honest in the debate, indeed, it usually isn’t a debate. Would you debate someone who thought the world was flat? If you were so foolish as to do so, what would happen? You’d present all the familiar observations -Earth’s shadow on the Moon, for example, – and demolish your opponent. Would he continue with his foolish ideas? You bet! He would loudly trumpet that he’d debated a competent, thoughtful scientist at the University of Somewhere. To outsiders, his pathetically ignorant ideas would gain credibility and his sponsors would continue to pay him. Lots of good people work hard to address ways to reverse global change and reduce species loss. Get on with solving problems and don’t waste time with fools.

4. What is the future of tropical biodiversity… ‘according to Pimm’?

The important message is that we can stem the loss of tropical biodiversity – its future is not yet written. We can slow the rate of deforestation and we know enough about the patterns of where the most vulnerable species live to make their protection a priority.

CJA Bradshaw

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(with thanks to Navjot Sodhi, Barry Brook, Ward Cooper, Wiley-Blackwell and Stuart Pimm for permission to reproduce the text – buy your copy of Tropical Conservation Biology here)





Classics: Fragmentation

3 10 2008
Synergies among threatening processes relative to habitat loss and fragmentation. a) A large population within unmodified, contiguous habitat occupies all available niches so that long-term abundance fluctuates near full carrying capacity (K). b) When habitat is reduced (e.g. 50 % area loss), total abundance declines accordingly. c) However, this simple habitat-abundance relationship is complicated by the spatial configuration of habitat loss. In this example, all remaining fragmented subpopulations might fall below their minimum viable population (MVP) sizes even though total abundance is the same proportion of K as in panel B. As such, limited connectivity between subpopulations implies much greater extinction risk than that predicted for the same habitat loss in less fragmented landscapes. Further synergies (positive feedbacks among threatening processes; black arrows) might accompany high fragmentation, such as enhanced penetration of predators, invasive species or wildfire, micro-habitat edge effects, and reduced resistance to drought with climate change.

Figure 2 from Brook et al. (2008): Synergies among threatening processes relative to habitat loss and fragmentation. a) A large population within unmodified, contiguous habitat occupies all available niches so that long-term abundance fluctuates near full carrying capacity (K). b) When habitat is reduced (e.g. 50 % area loss), total abundance declines accordingly. c) However, this simple habitat-abundance relationship is complicated by the spatial configuration of habitat loss. In this example, all remaining fragmented subpopulations might fall below their minimum viable population (MVP) sizes even though total abundance is the same proportion of K as in panel B. As such, limited connectivity between subpopulations implies much greater extinction risk than that predicted for the same habitat loss in less fragmented landscapes. Further synergies (positive feedbacks among threatening processes; black arrows) might accompany high fragmentation, such as enhanced penetration of predators, invasive species or wildfire, micro-habitat edge effects, and reduced resistance to drought with climate change.

This is, perhaps, one of the most important concepts that the field of conservation biology has identified as a major driver of extinction. It may appear on the surface a rather simple notion that the more ‘habitat’ you remove, the fewer species (and individuals) there will be (see MacArthur & Wilson’s Classic contribution: The Theory of Island Biogeography), but it took us decades (yes, embarrassingly – decades) to work out that fragmentation is bad (very, very bad).

Habitat fragmentation occurs when a large expanse of a particular, broadly defined habitat ‘type’ is reduced to smaller patches that are isolated by surrounding, but different habitats. The surrounding habitat is typically defined a ‘matrix’, and in the case of forest fragmentation, generally means ‘degraded’ habitat (fewer native species, urban/rural/agricultural development, etc.).

Fragmentation is bad for many reasons: it (1) reduces patch area, (2) increases isolation among populations associated with fragments, and (3) creates ‘edges’ where unmodified habitat abuts matrix habitat. Each of these has dire implications for species, for we now know that (1) the smaller an area, the fewer individuals and species in can contain, (2) the more isolated a population, the less chance immigrants will ‘rescue’ it from catastrophes, and (3) edges allow the invasion of alien species, make the microclimate intolerable, increase access to bad humans and lead to cascading ecological events (e.g., fire penetration). Make no mistake, the more fragmented an environment, the worse will be the extinction rates of species therein.

What’s particularly sad about all this is that fragmentation was actually seen as a potentially GOOD thing by conservation biologists for many long years. The so-called SLOSS (Single Large or Several Small) debate pervaded the early days of conservation literature. The debate was basically the argument that several small reserves would provide more types of habitat juxtapositions and more different species complexes, making overall diversity (species richness) higher, than one large reserve. It was an interesting, if not deluded, intellectual debate because both sides presented some rather clever theoretical and empirical arguments. Part of the attraction of the ‘Several Small’ idea was that it was generally easier to find series of small habitat fragments to preserve than one giant no-go area.

However, we now know that the ‘Several Small’ idea is completely inferior because of the myriad synergistic effects of fragmentation. It actually took Bruce Wilcox and Dennis Murphy until 1985 to bring this to everyone’s attention in their classic paper The effects of fragmentation on extinction to show how silly the SLOSS debate really was. It wasn’t, however, until the mid- to late 1990s that people finally started to accept the idea that fragmentation really was one of the biggest conservation evils. Subsequent work (that I’ll showcase soon on ConservationBytes.com) finally put the nail in the SLOSS debate coffin, and indeed, we haven’t heard a whisper of it for over a decade.

For more general information, I invite you to read the third chapter in our book Tropical Conservation Biology entitled Broken homes: tropical biotas in fragmented landscapes, and our recent paper in Trends in Ecology and Evolution entitled Synergies among extinction drivers under global change.

CJA Bradshaw

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Classics: The Living Dead

30 08 2008

‘Classics’ is a category of posts highlighting research that has made a real difference to biodiversity conservation. All posts in this category will be permanently displayed on the Classics page of ConservationBytes.com

© M. Baysan
© M. Baysan

Tilman, D., May, R.M., Lehman, C.L., Nowak, M.A. (1994) Habitat destruction and the extinction debt. Nature 371, 65-66

In my opinion, this is truly a conservation classic because it shatters optimistic notions that extinction is something only rarely the consequence of human activities (see relevant post here). The concept of ‘extinction debt‘ is pretty simple – as habitats become increasingly fragmented, long-lived species that are reproductively isolated from conspecifics may take generations to die off (e.g., large trees in forest fragments). This gives rise to a higher number of species than would be otherwise expected for the size of the fragment, and the false impression that many species can persist in habitat patches that are too small to sustain minimum viable populations.

These ‘living dead‘ or ‘zombie‘ species are therefore committed to extinction regardless of whether habitat loss is arrested or reversed. Only by assisted dispersal and/or reproduction can such species survive (an extremely rare event).

Why has this been important? Well, neglecting the extinction debt is one reason why some people have over-estimated the value of fragmented and secondary forests in guarding species against extinction (see relevant example here for the tropics and Brook et al. 2006). It basically means that biological communities are much less resilient to fragmentation than would otherwise be expected given data on species presence collected shortly after the main habitat degradation or destruction event. To appreciate fully the extent of expected extinctions may take generations (e.g., hundreds of years) to come to light, giving us yet another tool in the quest to minimise habitat loss and fragmentation.

CJA Bradshaw

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