Australia’s national parks aren’t ‘national’ at all

14 06 2013

Yarra-Ranges-National-Park-AustraliaFollowing our The Conversation article a few weeks ago about the rapid demise of national parks in Australia, a few of us (me, Euan Ritchie & Emma Johnston) wrote a follow-up piece on the Australia’s national park misnomer (published simultaneously on The Conversation).

Australia boasts over 500 national parks covering 28 million hectares of land, or about 3.6% of Australia. You could be forgiven for thinking we’re doing well in the biodiversity-conservation game.

But did you know that of those more than 500 national parks, only six are managed by the Commonwealth Government? For marine parks, it’s a little more: 61 of the 130-plus are managed primarily by the Commonwealth. This means that the majority of our important biodiversity refuges are managed exclusively by state and territory governments. In other words, our national parks aren’t “national” at all.

In a world of perfect governance, this wouldn’t matter. But we’re seeing the rapid “relaxation” of laws designed to protect our “national” and marine parks by many state governments. Would making all of them truly national do more to conserve biodiversity?

One silly decision resulting in a major ecosystem disturbance in a national park can take decades if not hundreds of years to heal. Ecosystems are complex interactions of millions of species that take a long time to evolve – they cannot be easily repaired once the damage is done.

Almost overnight, Queensland, New South Wales and Victoria have rolled back nearly two centuries of park protection. What’s surprising here is that many of our conservation gains in the last few decades (for example, the Natural Heritage Trust, the National Reserve System, the Environment Protection and Biodiversity Conservation Act and anational marine reserve network) originated from Coalition policies. Read the rest of this entry »





Our national parks must be more than playgrounds or paddocks

24 05 2013

Convo TweetsIt’s interesting when a semi-random tweet by a colleague ends up mobilising a small army of scientists to get pissed off enough to co-write an article. Euan Ritchie of Deakin University started it off, and quickly recruited me, Mick McCarthy, David Watson, Ian Lunt, Hugh Possingham, Bill Laurance and Emma Johnston to put together the article. It’s a hugely important topic, so I hope it generates a lot of discussion and finally, some bloody action to stop the rapid destruction of this country’s national parks system.

Note: Published simultaneously on The Conversation.

It’s make or break time for Australia’s national parks.

National parks on land and in the ocean are dying a death of a thousand cuts, in the form of bullets, hooks, hotels, logging concessions and grazing licences. It’s been an extraordinary last few months, with various governments in eastern states proposing new uses for these critically important areas.

Australia’s first “National Park”, established in 1879, was akin to a glorified country club. Now called the “Royal National Park” on the outskirts of Sydney, it was created as a recreational escape for Sydney-siders, with ornamental plantations, a zoo, race courses, artillery ranges, livestock paddocks, deer farms, logging leases and mines.

Australians since realised that national parks should focus on protecting the species and natural landscapes they contain. However, we are now in danger of regressing to the misguided ideals of the 19th Century.

Parks under attack

In Victoria, new rules will allow developers to build hotels and other ventures in national parks. In New South Wales, legislation has been introduced to allow recreational shooting in national parks, and there is pressure to log these areas too. Read the rest of this entry »





Software tools for conservation biologists

8 04 2013

computer-programmingGiven the popularity of certain prescriptive posts on ConservationBytes.com, I thought it prudent to compile a list of software that my lab and I have found particularly useful over the years. This list is not meant to be comprehensive, but it will give you a taste for what’s out there. I don’t list the plethora of conservation genetics software that is available (generally given my lack of experience with it), but if this is your chosen area, I’d suggest starting with Dick Frankham‘s excellent book, An Introduction to Conservation Genetics.

1. R: If you haven’t yet loaded the open-source R programming language on your machine, do it now. It is the single-most-useful bit of statistical and programming software available to anyone anywhere in the sciences. Don’t worry if you’re not a fully fledged programmer – there are now enough people using and developing sophisticated ‘libraries’ (packages of functions) that there’s pretty much an application for everything these days. We tend to use R to the exclusion of almost any other statistical software because it makes you learn the technique rather than just blindly pressing the ‘go’ button. You could also stop right here – with R, you can do pretty much everything else that the software listed below does; however, you have to be an exceedingly clever programmer and have a lot of spare time. R can also sometimes get bogged down with too much filled RAM, in which case other, compiled languages such as PYTHON and C# are useful.

2. VORTEX/OUTBREAK/META-MODEL MANAGER, etc.: This suite of individual-based projection software was designed by Bob Lacy & Phil Miller initially to determine the viability of small (usually captive) populations. The original VORTEX has grown into a multi-purpose, powerful and sophisticated population viability analysis package that now links to its cousin applications like OUTBREAK (the only off-the-shelf epidemiological software in existence) via the ‘command centre’ META-MODEL MANAGER (see an examples here and here from our lab). There are other add-ons that make almost any population projection and hindcasting application possible. And it’s all free! (warning: currently unavailable for Mac, although I’ve been pestering Bob to do a Mac version).

3. RAMAS: RAMAS is the go-to application for spatial population modelling. Developed by the extremely clever Resit Akçakaya, this is one of the only tools that incorporates spatial meta-population aspects with formal, cohort-based demographic models. It’s also very useful in a climate-change context when you have projections of changing habitat suitability as the base layer onto which meta-population dynamics can be modelled. It’s not free, but it’s worth purchasing. Read the rest of this entry »





Want to work with us?

22 03 2013
© Beboy-Fotolia

© Beboy-Fotolia

Today we announced a HEAP of positions in our Global Ecology Lab for hot-shot, up-and-coming ecologists. If you think you’ve got what it takes, I encourage you to apply. The positions are all financed by the Australian Research Council from grants that Barry Brook, Phill Cassey, Damien Fordham and I have all been awarded in the last few years. We decided to do a bulk advertisement so that we maximise the opportunity for good science talent out there.

We’re looking for bright, mathematically adept people in palaeo-ecology, wildlife population modelling, disease modelling, climate change modelling and species distribution modelling.

The positions are self explanatory, but if you want more information, just follow the links and contacts given below. For my own selfish interests, I provide a little more detail for two of the positions for which I’m directly responsible – but please have a look at the lot.

Good luck!

CJA Bradshaw

Job Reference Number: 17986 & 17987

The world-leading Global Ecology Group within the School of Earth and Environmental Sciences currently has multiple academic opportunities. For these two positions, we are seeking a Postdoctoral Research Associate and a Research Associate to work in palaeo-ecological modelling. Read the rest of this entry »





Food for sex

18 03 2013
Quercus_KakFeed Photo
Kakapo are unique among the ~ 400 parrot species (Psittaciformes) for being flightless, nocturnal and extremely long-lived (up to 100 years!). Additionally, they are herbivorous (seeds, fruits, polen, plants), males can weigh up to 2-4 kg (40% heavier than females), and females lay their eggs on the ground or cavities – i.e., 3 eggs in a single clutch annually, although 2 clutches might occur if the nest fails at the beginning of the reproductive season or if the eggs are taken for artificial incubation.Native to New Zealand, kakapo once inhabited the subalpine fringes of forest and scrub. Polynesians (1000 years ago) and Europeans (mostly in the XIX Century) arrived in the archipelago accompanied by dogs, cats, rats and mustelids that cornered kakapo populations in the Fiordland region (south-west of the South Island) where it was declared extinct in 1989. In 1977, a population of some 200 individuals was found on Stewart Island - this population was already in decline to the claws and jaws of feral cats. By the 1980s, the failure of captive breeding programs prompted the transfer of 60 individuals from Steward to carnivore-free islands. The global (known) population ‘rocketed’ from 50 individuals in 1999 to 126 in the 2012 censuses and, consequently, the kakapo’s IUCN status changed in 2000 from ‘Extinct in the Wild’ to ‘Critically Endangered’. Under the management of the Kakapo Recovery Programme, kakapo are now present on the islands of CodfishAnchor and Little Barrier.

Inbreeding, system shocks caused by fire or cyclones (for example), or demographic stochasticity (by which two or more outcomes are possible) such as how many males and females will be born in a single year, are all factors that threaten the persistence of small and fragmented populations. They can, however, be reverted by conservation actions.

If you have ever taken dancing classes, you will be familiar with the scarcity of male partners and how this can jeopardize group learning. When reproduction, rather than salsa pirouettes, is at stake, a biased sex ratio can compromise the persistence of species. For instance, when females are unable to find males (or vice versa), fertility rates can collapse as a result – a well-known cause of an Allee effect (1). Curiously, natural selection can promote such bias by favouring a species’ investment in litters dominated by one of the two genders. The evolutionary formulation of such scenario is that females can adjust the sex ratio of their offspring depending on the amount of available resources (2) – see contrasting cross-taxa studies on this subject (3-5). Thus, when resources abound (e.g., food), mothers can afford the offspring’s gender requiring more resources to reach adulthood or once adulthood is reached, is less likely to reproduce successfully (6). This predisposition to one gender or another can be key to the conservation of endangered species (7).

The kakapo case

At the end of the 1990s, the New Zealand Department of Conservation placed dispensers of supplementary food in the territories of some kakapo (a rather enormous, flightless parrot Strigops habroptilus) to encourage their reproduction. Back then, only 60 individuals were left of the entire species . Unfortunately, those females with access to the supplemental food conceived 67% of male chicks (so exacerbating the fact that kakapo populations are naturally male-biased), while those females without extra feeding had 71% of female chicks (8). Something wasn’t working. Read the rest of this entry »





De-extinction is about as sensible as de-death

15 03 2013

Published simultaneously in The Conversation.


On Friday, March 15 in Washington DC, National Geographic and TEDx are hosting a day-long conference on species-revival science and ethics. In other words, they will be debating whether we can, and should, attempt to bring extinct animals back to life – a concept some call “de-extinction”.

The debate has an interesting line-up of ecologists, geneticists, palaeontologists (including Australia’s own Mike Archer), developmental biologists, journalists, lawyers, ethicists and even artists. I have no doubt it will be very entertaining.

But let’s not mistake entertainment for reality. It disappoints me, a conservation scientist, that this tired fantasy still manages to generate serious interest. I have little doubt what the ecologists at the debate will conclude.

Once again, it’s important to discuss the principal flaws in such proposals.

Put aside for the moment the astounding inefficiency, the lack of success to date and the welfare issues of bringing something into existence only to suffer a short and likely painful life. The principal reason we should not even consider the technology from a conservation perspective is that it does not address the real problem – mainly, the reason for extinction in the first place.

Even if we could solve all the other problems, if there is no place to put these new individuals, the effort and money expended is a complete waste. Habitat loss is the principal driver of species extinction and endangerment. If we don’t stop and reverse this now, all other avenues are effectively closed. Cloning will not create new forests or coral reefs, for example. Read the rest of this entry »





Crying ‘wolf’ overlooks the foxes: challenging ‘planetary tipping points’

28 02 2013

tipping pointToday, a paper by my colleague, Barry Brook, appeared online in Trends in Ecology and Evolution. It’s bound to turn a few heads.

Let’s not get distracted by the title of the post, or the potential for a false controversy. It’s important to be clear that the planet is indeed ill, and it’s largely due to us. Species are going extinct faster than the would have otherwise. The planet’s climate system is being severely disrupted, so is the carbon cycle. Ecosystem services are on the decline.

But – and it’s a big ‘but’ – we have to be wary of claiming the end of the world as we know it or people will shut down and continue blindly with their growth and consumption obsession. We as scientists also have to be extremely careful not to pull concepts and numbers out of our bums without empirical support.

Specifically, I’m referring to the latest ‘craze’ in environmental science writing – the idea of ‘planetary tipping points‘ and the related ‘planetary boundaries‘. It’s really the stuff of Hollywood disaster blockbusters – the world suddenly shifts into a new ‘state’ where some major aspect of how the world functions does an immediate about-face. Read the rest of this entry »





Declining biodiversity in… your filthy mouth

18 02 2013

green teethIt still amazes me that the more we look, the more we realise just how important intact ecosystems are for our own well-being. I guess this is why I’m still a scientist.

Our latest paper that just came out today in Nature Genetics is a bit of a departure for me (again!); I really must not take much credit for this given that it was a huge effort among a big team of people and I played a comparatively minor role. Still, I can definitely say this is one of the more interesting papers I’ve co-authored in a while.

For me the involvement started after Alan Cooper (Director of the Australian Centre for Ancient DNA) asked me for a bit of help with a cool paper he and some of his colleagues were working on. When he told me what the subject was, my initial reaction was (yawn): Dentistry? Teeth? You’ve got to be joking. Why would an ecologist be even remotely interested in that stuff? Then he went into more detail, and I was hooked.

Before I get into that detail, I have to tell you a story about a colleague of mine (name withheld, but true story) who recently went to the dentist to have some routine cleaning and maintenance done. There was nothing particularly special about his visit – no local anaesthetic, no extractions, no caps, and certainly no surgery. Two weeks later he was in the hospital theatre getting his chest cracked open for open-heart surgery. Jesus H. Christ!, I said to myself. Read the rest of this entry »





Science immortalised in cartoon

1 02 2013

Well, this is a first for me (us).

I’ve never had a paper of ours turned into a cartoon. The illustrious and brilliant ‘First Dog on the Moon‘ (a.k.a. Andrew Marlton) who is chief cartoonist for Australia’s irreverent ‘Crikey‘ online news magazine just parodied our Journal of Animal Ecology paper No need for disease: testing extinction hypotheses for the thylacine using multispecies metamodels that I wrote about a last month here on ConservationBytes.com.

Needless to say, I’m chuffed as a chuffed thing.

Enjoy!

Stripey





Having more tree species makes us wealthier

28 01 2013

money treeAs more and more empirical evidence pours in from all corners of the globe, we can only draw one conclusion about the crude measure of species richness (i.e., number of species) – having more species around makes us richer.

And I’m not talking about the esoteric or ‘spiritual’ richness that the hippies dribble about around the campfire after a few dozen cones pulled off the bong (I’ll let the confused among you try to work the meaning of that one out by yourselves), I’m talking about real money (incorporated into my concept of ‘biowealth‘).

The idea that ‘more is better’ in terms of the number of species has traditionally found some (at times, conflicting) empirical support in the plant ecology literature, the latest evidence about which I wrote last year. This, the so-called ‘diversity-productivity’ relationship (DPR), demonstrates that as a forest or grass ecosystem gains more species, its average or total biomass production increases.

Read the rest of this entry »





Scaring our children with the future

21 01 2013

frightened childI’ve written before about how we should all be substantially more concerned about the future than what we as a society appear to be. Climate disruption is society’s enemy number one, especially considering that:

  1. all this unprecedented warming is happening on a template of highly degraded land- and seascapes. Extinction synergies (more extinctions than would otherwise be predicted by the simple sum of the different pressures) mean that climate change exacerbates the extinctions to which we are already committed;
  2. we show no sign of slowing emissions rates, partly because of the world’s ridiculous refusal to embrace the only known energy technology that can safely meet emissions-reduction requirements: nuclear power;
  3. there are 7 billion hungry, greedy humans on planet Earth, and that number is growing;
  4. scientific evidence denial, plutocracy and theocracy are all on the rise, meaning that logical, evidence-based decision making is being progressively tossed out the window.

That’s probably the most succinct way that I know of describing the mess we are in, which is why I tend to be more of a pragmatic pessimist when it comes to the future. I’ve discussed before how this outlook makes getting on with my job even more important – if I can’t reduce the rate of destruction and give my family a slightly better future in spite of this reality, at least I will damn well die trying. Read the rest of this entry »





Translocations: the genetic rescue paradox

14 01 2013

helphindranceHarvesting and habitat alteration reduce many populations to just a few individuals, and then often extinction. A widely recommended conservation action is to supplement those populations with new individuals translocated from other regions. However, crossing local and foreign genes can worsen the prospects of recovery.

We are all hybrids or combinations of other people, experiences and things. Let’s think of teams (e.g., engineers, athletes, mushroom collectors). In team work, isolation from other team members might limit the appearance of innovative ideas, but the arrival of new (conflictive) individuals might in fact destroy group dynamics altogether. Chromosomes work much like this – too little or too much genetic variability among parents can break down the fitness of their descendants. These pernicious effects are known as ‘inbreeding depression‘ when they result from reproduction among related individuals, and ‘outbreeding depression‘ when parents are too genetically distant.

CB_OutbreedingDepression Photo
Location of the two USA sites providing spawners of largemouth bass for the experiments by Goldberg et al. (3): the Kaskaskia River (Mississipi Basin, Illinois) and the Big Cedar Lake (Great Lakes Basin, Wisconsin). Next to the map is shown an array of three of the 72-litre aquaria in an indoor environment under constant ambient temperature (25 ◦C), humidity (60%), and photoperiod (alternate 12 hours of light and darkness). Photo courtesy of T. Goldberg.

Recent studies have revised outbreeding depression in a variety of plants, invertebrates and vertebrates (1, 2). An example is Tony Goldberg’s experiments on largemouth bass (Micropterus salmoides), a freshwater fish native to North America. Since the 1990s, the USA populations have been hit by disease from a Ranavirus. Goldberg et al. (3) sampled healthy individuals from two freshwater bodies: the Mississipi River and the Great Lakes, and created two genetic lineages by having both populations isolated and reproducing in experimental ponds. Then, they inoculated the Ranavirus in a group of parents from each freshwater basin (generation P), and in the first (G1) and second (G2) generations of hybrids crossed from both basins. After 3 weeks in experimental aquaria, the proportion of survivors declined to nearly 30% in G2, and exceeded 80% in G1 and P. Clearly, crossing of different genetic lineages increased the susceptibility of this species to a pathogen, and the impact was most deleterious in G2. This investigation indicates that translocation of foreign individuals into a self-reproducing population can not only import diseases, but also weaken its descendants’ resistance to future epidemics.

A mechanism causing outbreeding depression occurs when hybridisation alters a gene that is only functional in combination with other genes. Immune systems are often regulated by these complexes of co-adapted genes (‘supergenes’) and their disruption is a potential candidate for the outbreeding depression reported by Goldberg et al. (3). Along with accentuating susceptibility to disease, outbreeding depression in animals and plants can cause a variety of deleterious effects such as dwarfism, low fertility, or shortened life span. Dick Frankham (one of our collaborators) has quantified that the probability of outbreeding depression increases when mixing takes place between (i) different species, (ii) conspecifics adapted to different habitats, (iii) conspecifics with fixed chromosomal differences, and (iv) populations free of genetic flow with other populations for more than 500 years (2).

A striking example supporting (some of) those criteria is the pink salmon (Oncorhynchus gorbuscha) from Auke Creek near Juneau (Alaska). The adults migrate from the Pacific to their native river where they spawn two years after birth, with the particularity that there are two strict broodlines that spawn in either even or odd year – that is, the same species in the same river, but with a lack of genetic flow between populations. In vitro mixture of the two broodlines and later release of hybrids in the wild have shown that the second generation of hybrids had nearly 50% higher mortality rates (i.e., failure to return to spawn following release) when born from crossings of parents from different broodlines than when broodlines were not mixed (4).

Read the rest of this entry »





No need for disease

7 01 2013

dead or alive thylacineIt’s human nature to abhor admitting an error, and I’d wager that it’s even harder for the average person (psycho- and sociopaths perhaps excepted) to admit being a bastard responsible for the demise of someone, or something else. Examples abound. Think of much of society’s unwillingness to accept responsibility for global climate disruption (how could my trips to work and occasional holiday flight be killing people on the other side of the planet?). Or, how about fishers refusing to believe that they could be responsible for reductions in fish stocks? After all, killing fish couldn’t possibly …er, kill fish? Another one is that bastion of reverse racism maintaining that ancient or traditionally living peoples (‘noble savages’) could never have wiped out other species.

If you’re a rational person driven by evidence rather than hearsay, vested interest or faith, then the above examples probably sound ridiculous. But rest assured, millions of people adhere to these points of view because of the phenomenon mentioned in the first sentence above. With this background then, I introduce a paper that’s almost available online (i.e., we have the DOI, but the online version is yet to appear). Produced by our extremely clever post-doc, Tom Prowse, the paper is entitled: No need for disease: testing extinction hypotheses for the thylacine using multispecies metamodels, and will soon appear in Journal of Animal Ecology.

Of course, I am biased being a co-author, but I think this paper really demonstrates the amazing power of retrospective multi-species systems modelling to provide insight into phenomena that are impossible to test empirically – i.e., questions of prehistoric (and in some cases, even data-poor historic) ecological change. The megafauna die-off controversy is one we’ve covered before here on ConservationBytes.com, and this is a related issue with respect to a charismatic extinction in Australia’s recent history – the loss of the Tasmanian thylacine (‘tiger’, ‘wolf’ or whatever inappropriate eutherian epithet one unfortunately chooses to apply). Read the rest of this entry »





The biggest go first

11 12 2012
© James Cameron

© James Cameron

The saying “it isn’t rocket science” is a common cliché in English to state, rather sarcastically, that something isn’t that difficult (with the implication that the person complaining about it, well, shouldn’t). But I really think we should change the saying to “it isn’t ecology”, for ecology is perhaps one of the most complex disciplines in science (whereas rocket science is just ‘complicated’). One of our main goals is to predict how ecosystems will respond to change, yet what we’re trying to simplify when predicting is the interactions of millions of species and individuals, all responding to each other and to their outside environment. It becomes quickly evident that we’re dealing with a system of chaos. Rocket science is following recipes in comparison.

Because of this complexity, ecology is a discipline plagued by a lack of generalities. Few, if any, ecological laws exist. However, we do have an abundance of rules of thumb that mostly apply in most systems. I’ve written about a few of them here on ConservationBytes.com, such as the effect of habitat patch size on species diversity, the importance of predators for maintaining ecosystem stability, and that low genetic diversity doesn’t exactly help your chances of persisting. Another big one is, of course, that in an era of rapid change, big things tend to (but not always – there’s that lovely complexity again) drop off the perch before smaller things do.

The prevailing wisdom is that big species have slower life history rates (reproduction, age at first breeding, growth, etc.), and so cannot replace themselves fast enough when the pace of their environment’s change is too high. Small, rapidly reproducing species, on the other hand, can compensate for higher mortality rates and hold on (better) through the disturbance. Read the rest of this entry »





Improving the Roundtable on Sustainable Palm Oil

23 11 2012

RSPO – don’t be guilty of this

Laurance & Pimm organise another excellent tropical conservation open-letter initiative. This follows our 2010 paper (Improving the performance of the Roundtable on Sustainable Oil Palm for nature conservation) in Conservation Biology.

Scientists Statement on the Roundtable on Sustainable Palm Oil’s Draft Revised Principles and Criteria for Public Consultation – November 2012

As leading scientists with prominent academic and research institutions around the world, we write to encourage the Roundtable on Sustainable Palm Oil (RSPO) to use this review of the RSPO Principles and Criteria as an opportunity to ensure that RSPO-certified sustainable palm oil is grown in a manner that protects tropical forests and the health of our planet. We applaud the RSPO for having strong social and environmental standards, but palm oil cannot be considered sustainable without also having greenhouse gas standards. Nor can it be considered sustainable if it drives species to extinction.

Tropical forests are critical ecosystems that must be conserved. They are home to millions of plant and animal species, are essential for local water-cycling, and store vast amounts of carbon. When they are cleared, biodiversity is lost and the carbon is released into the atmosphere as carbon dioxide, a greenhouse gas that drives climate change.

Moreover, tropical areas with peat soils store even larger amounts of carbon and when water is drained and the soils exposed, carbon is released into the atmosphere for several decades, driving climate changei. In addition, peat exposed to water in drainage canals may decay anaerobically, producing methane – a greenhouse more potent than carbon dioxide.

Palm oil production continues to increase in the tropics, and in some cases that production is directly driving tropical deforestation and the destruction of peatlandsii. Given the large carbon footprint and irreparable biodiversity loss such palm oil production cannot be considered sustainable. Read the rest of this entry »





Protected areas work, but only when you put in the effort

15 11 2012

Apologies for the delay in getting this latest post out. If you read my last one, you’ll know that I’ve been in the United Kingdom for the last week. I’m writing this entry in the train down from York to Heathrow, from which I’ll shortly begin the gruelling 30-hour trip home to Adelaide.

Eight days on the other side of the planet is a bit of a cyclonic trip, but I can honestly say that it was entirely worth it. My first port of call was London where I attended the Zoological Society of London’s Protected Areas Symposium, which is the main topic on which I’ll elaborate shortly.

But I also visited my friend and colleague, Dr. Kate Parr at the University of Liverpool, where I also had the pleasure of talking with Rob Marrs and Mike Begon. Liverpool was also where I first observed the habits of a peculiar, yet extremely common species – the greater flabby, orange-skinned, mini-skirted, black-eyed scouser. Fascinating.

I then had the privilege and serendipitous indulgence of visiting the beautiful and quaint city of York where I gave another talk to the Environment Department at the University of York. My host, Dr. Kate Arnold was simply lovely, and I got to speak with a host of other very clever people including Callum Roberts, Phil Platts, Andy Marshall and Murray Rudd. Between the chats and real ales, mushy peas, pork pies and visits to the Minster, I was in north English heaven.

Enough of the cultural compliments – the title of this post was the take-home message of the ZSL symposium. There I gave a 25-minute talk summarising our recent paper on the performance of tropical protected areas around the globe, and added a few extra analyses in the process. One interesting result that was missing from the original paper was the country-level characteristics that explain variation in protected area ‘health’ (as we defined it in the Nature paper). After looking at a number of potential drives, including per-capita wealth, governance quality, environmental performance, human population density and the proportion of high conservation-value protected areas (IUCN Ia, Ib, II and IV categories), it came out that at least at that coarse country scale that only the proportion of high conservation-value protected areas explained any additional variation in health. In other words, the more category Ia, Ib, II and IV protected areas a country has (relative to the total), the better their protected areas do on average (and remember, we’re talking largely about developing and tropical nations here). Read the rest of this entry »





The Biodiversity Club

11 10 2012

The International Union for Conservation of Nature (IUCN) Red List of Threatened Species uses 5 quantitative criteria to allocate species to 9 categories of extinction risk. The criteria are based on ecological theory (1, 2), and are therefore subject to modification and critique. With pros and cons (3-6), and intrigues (7, 8), the list has established itself as an important tool for assessing the state of biodiversity globally and, more recently, regionally.

We all carry codes of some sort; that is, unique alphanumeric labels identifying our membership in a collectivity. Some of those codes (e.g., a videoclub customer number) make sense only locally, some do internationally (e.g., passport number). Species are also members of the club of biodiversity and, by virtue of our modern concern for their conservation, the status of many taxa has been allocated to alphanumeric categories under different rationales such as extinction risk or trading schemes (5, 9-13). Contradiction emerges when taxa might be threatened locally but not internationally, or vice versa.

In the journal Biological Conservation, a recent paper (14) has echoed the problem for the seagrass Zostera muelleri. This marine phanerogam occurs in Australia, New Zealand and Papua New Guinea, and is listed as “Least Concern” (LC) with “Stable” population trend by the IUCN. Matheson et al. (14) stated that such status neglects the “substantial loss” of seagrass habitats in New Zealand, and that the attribution of “prolific seed production” to the species reflects the IUCN assessment bias towards Australian populations. The IUCN Seagrass Red List Authority, Fred Short, responded (15) that IUCN species ratings indicate global status (i.e., not representative for individual countries) and that, based on available quantitative data and expert opinion, the declines of Z. muelleri are localised and offset by stable or expanding populations throughout its range. Read the rest of this entry »





Tropical protected areas still in trouble

8 10 2012

© P. Harris

There’s nothing like a bit of good, intelligent and respectful debate in science.

After the publication in Nature of our paper on tropical protected areas (Averting biodiversity collapse in tropical forest protected areas), some interesting discussion has ensued regarding some of our assumptions and validations.

As is their wont, Nature declined to publish these comments (and our responses) in the journal itself, but the new commenting feature at Nature.com allowed the exchange to be published online with the paper. Cognisant that probably few people will read this exchange, Bill Laurance and I decided to reproduce them here in full for your intellectual pleasure. Any further comments? We’d be keen to hear them.

COMMENT #1 (by Hari Sridhar of the Centre for Ecological Sciences at the Indian Institute of Science in Bangalore)

In this paper, Laurance and co-authors have tapped the expert opinions of ‘veteran field biologists and environmental scientists’ to understand the health of protected areas in the tropics worldwide. This is a novel and interesting approach and the dataset they have gathered is very impressive. Given that expert opinion can be subject to all kinds of biases and errors, it is crucial to demonstrate that expert opinion matches empirical reality. While the authors have tried to do this by comparing their results with empirical time-series datasets, I argue that their comparison does not serve the purpose of an independent validation.

Using 59 available time-series datasets from 37 sources (journal papers, books, reports etc.), the authors find a fairly good match between expert opinion and empirical data (in 51/59 cases, expert opinion matched empirically-derived trend). For this comparison to serve as an independent validation, it is crucial that the experts were unaware of the empirical trends at the time of the interviews. However, this is unlikely to be true because, in most cases, the experts themselves were involved in the collection of the time-series datasets (at least 43/59 to my knowledge, from a scan of references in Supplementary Table 1). In other words, the same experts whose opinions were being validated were involved in collection of the data used for validation.

OUR RESPONSE (William F. Laurance, Corey J. A. Bradshaw, Susan G. Laurance)

Sridhar raises a relevant point but one that, on careful examination, does not weaken our validation analysis. Read the rest of this entry »





Hades, fossilised fat-parrot shit and threatened bats

4 10 2012

WTF? © P. Bendle

Sounds like a Monty Python sketch, doesn’t it? But no, it’s about the wonderful complexity of ecology.

An interesting, and very weird paper just came out in Conservation Biology co-authored by my friend and colleague, Prof. Alan Cooper at the Australian Centre for Ancient DNA (ACAD).

Here’s what they have to say about it.

Ancient dung from a cave in the South Island of New Zealand has revealed a previously unsuspected relationship between two of the country’s most unusual threatened species.

Fossilised dung (coprolites) of a now rare parrot, the nocturnal flightless kakapo, contained large amounts of pollen of a rare parasitic plant, Dactylanthus, which lives underground and has no roots or leaves itself. The pollen suggests the kakapo was formerly an important pollinator for the threatened species, known as the Hades flower or wood rose. Researchers from the Australian Centre for Ancient DNA at The University of Adelaide, and Landcare Research and the Department of Conservation in New Zealand report the discovery in the journal Conservation Biology.

Read the rest of this entry »





No-extinction targets are destined to fail

21 09 2012

I’ve been meaning to write about this for a while, and now finally I have been given the opportunity to put my ideas ‘down on paper’ (seems like a bit of an old-fashioned expression these days). Now this post might strike some as overly parochial because it concerns the state in which I live, but the concept applies to every jurisdiction that passes laws designed to protect biodiversity. So please look beyond my navel and place the example within your own specific context.

As CB readers will appreciate, I am firmly in support of the application of conservation triage – that is, the intelligent, objective and realistic way of attributing finite resources to minimise extinctions for the greatest number of (‘important’) species. Note that deciding which species are ‘important’ is the only fly in the unguent here, with ‘importance’ being defined inter alia as having a large range (to encompass many other species simultaneously), having an important ecological function or ecosystem service, representing rare genotypes, or being iconic (such that people become interested in investing to offset extinction.

But without getting into the specifics of triage per se, a related issue is how we set environmental policy targets. While it’s a lovely, utopian pipe dream that somehow our consumptive 7-billion-and-growing human population will somehow retract its massive ecological footprint and be able to save all species from extinction, we all know that this is irrevocably  fantastical.

So when legislation is passed that is clearly unattainable, why do we accept it as realistic? My case in point is South Australia’s ‘No Species Loss Strategy‘ (you can download the entire 7.3 Mb document here) that aims to

“…lose no more species in South Australia, whether they be on land, in rivers, creeks, lakes and estuaries or in the sea.”

When I first learned of the Strategy, I instantly thought to myself that while the aims are laudable, and many of the actions proposed are good ones, the entire policy is rendered toothless by the small issue of being impossible. Read the rest of this entry »








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