The Biodiversity Club

11 10 2012

The International Union for Conservation of Nature (IUCN) Red List of Threatened Species uses 5 quantitative criteria to allocate species to 9 categories of extinction risk. The criteria are based on ecological theory (1, 2), and are therefore subject to modification and critique. With pros and cons (3-6), and intrigues (7, 8), the list has established itself as an important tool for assessing the state of biodiversity globally and, more recently, regionally.

We all carry codes of some sort; that is, unique alphanumeric labels identifying our membership in a collectivity. Some of those codes (e.g., a videoclub customer number) make sense only locally, some do internationally (e.g., passport number). Species are also members of the club of biodiversity and, by virtue of our modern concern for their conservation, the status of many taxa has been allocated to alphanumeric categories under different rationales such as extinction risk or trading schemes (5, 9-13). Contradiction emerges when taxa might be threatened locally but not internationally, or vice versa.

In the journal Biological Conservation, a recent paper (14) has echoed the problem for the seagrass Zostera muelleri. This marine phanerogam occurs in Australia, New Zealand and Papua New Guinea, and is listed as “Least Concern” (LC) with “Stable” population trend by the IUCN. Matheson et al. (14) stated that such status neglects the “substantial loss” of seagrass habitats in New Zealand, and that the attribution of “prolific seed production” to the species reflects the IUCN assessment bias towards Australian populations. The IUCN Seagrass Red List Authority, Fred Short, responded (15) that IUCN species ratings indicate global status (i.e., not representative for individual countries) and that, based on available quantitative data and expert opinion, the declines of Z. muelleri are localised and offset by stable or expanding populations throughout its range. Read the rest of this entry »





Get boreal

7 06 2012

I’ve been a little quiet this last week because I’ve had to travel to the other side of the planet for what turned out to be a very interesting and scientifically lucrative workshop. After travelling 31 hours from Adelaide to Umeå in northern Sweden, I wondered to myself if it was going to be worth it for a 2.5-day workshop on a little island (Norrbyskär) in the Baltic Sea (which, as it turned out, didn’t have internet access).

The answer is a categorical ‘yes’!

Many of you know that I’ve dabbled in boreal forest conservation in the past, but I could never claim any real expertise in the area. Hence it came as something of a shock when Jon Moen of Umeå University asked me to attend a specialist workshop focused loosely on making the plight and importance of the boreal forest more widely acknowledged. I dragged my feet initially, but Jon convinced me that I could add something to the mix.

It was a small workshop, but well-represented by all boreal countries save Norway (i.e., we had Russians, Swedes, Finns, Canadians and Americans – this Australian was indeed the odd one out). We also had a wide array of expertise, from carbon accountants, political scientists, political economists, native cultures experts, ecologists to foresters. Our mandate – justify why we should pay more attention to this globally important region.

Just how important is the boreal forest? We managed to unearth some little-appreciated facts: Read the rest of this entry »





Better SAFE than sorry

30 11 2011

Last day of November already – I am now convinced that my suspicions are correct: time is not constant and in fact accelerates as you age (in mathematical terms, a unit of time becomes a progressively smaller proportion of the time elapsed since your birth, so this makes sense). But, I digress…

This short post will act mostly as a spruik for my upcoming talk at the International Congress for Conservation Biology next week in Auckland (10.30 in New Zealand Room 2 on Friday, 9 December) entitled: Species Ability to Forestall Extinction (SAFE) index for IUCN Red Listed species. The post also sets a bit of the backdrop to this paper and why I think people might be interested in attending.

As regular readers of CB will know, we published a paper this year in Frontiers in Ecology and the Environment describing a relatively simple metric we called SAFE (Species Ability to Forestall Extinction) that could enhance the information provided by the IUCN Red List of Threatened Species for assessing relative extinction threat. I won’t go into all the detail here (you can read more about it in this previous post), but I do want to point out that it ended up being rather controversial.

The journal ended up delaying final publication because there were 3 groups who opposed the metric rather vehemently, including people who are very much in the conservation decision-making space and/or involved directly with the IUCN Red List. The journal ended up publishing our original paper, the 3 critiques, and our collective response in the same issue (you can read these here if you’re subscribed, or email me for a PDF reprint). Again, I won’t go into an detail here because our arguments are clearly outlined in the response.

What I do want to highlight is that even beyond the normal in-print tête-à-tête the original paper elicited, we were emailed by several people behind the critiques who were apparently unsatisfied with our response. We found this slightly odd, because many of the objections just kept getting re-raised. Of particular note were the accusations that: Read the rest of this entry »





Twenty landmark papers in biodiversity conservation

13 10 2011

While I can’t claim that this is the first time one of my peer-reviewed papers has been inspired by ConservationBytes.com, I can claim that this is the first time a peer-reviewed paper is derived from the blog.

After a bit of a sordid history of review (isn’t it more and more like that these days?), I have the pleasure of announcing that our paper ‘Twenty landmark papers in biodiversity conservation‘ has now been published as an open-access chapter in the new book ‘Research in Biodiversity – Models and Applications‘ (InTech).

Perhaps not the most conventional of venues (at least, not for me), but it is at the very least ‘out there’ now and freely available.

The paper itself was taken, modified, elaborated and over-hauled from text written in this very blog – the ‘Classics‘ section of ConservationBytes.com. Now, if you’re an avid follower of CB, then the chapter won’t probably represent anything terribly new; however, I encourage you to read it anyway given that it is a vetted overview of possibly some of the most important papers written in conservation biology.

If you are new to the field, an active student or merely need a ‘refresher’ regarding the big leaps forward in this discipline, then this chapter is for you.

The paper’s outline is as follows: Read the rest of this entry »





Taxonomy in the clouds

4 07 2011

Another post (see previous here, here and here) by my aspiring science-communicator PhD student, Salvador Herrando-Pérez.

Taxonomy uses rigorous rules of nomenclature to classify living beings, so every known species has a given ‘name’ and ‘surname’. The revision of certain taxonomic groups (particularly through genetic analyses) is favouring the proliferation of nominally new species, often propelled by virtue of their charisma and conservation status.

In secondary school, most of my classmates associated the subject ‘Biology’ with unpronounceable Latin taxonomic names, with which all known living beings are branded — ‘Canis lupus’ reads the identity card of humanity’s best friend. When the Swedish monk Carl Linnaeus proposed such binomial nomenclature, he could hardly imagine that, two hundred years later, his terminology would underpin national and transnational budgets for species conservation. Taxonomic nomenclature allows the classification of species into clusters of the same kind (e.g., diatoms, amanitas, polychaetes, skinks), and the calculation of an indispensable figure for conservation purposes: how many species are there at a given location, range, country, continent, or the entire planet?

Traditionally, taxonomists described species by examining their (external and internal) morphological features, the widest consensus being that two individuals of different species could not hybridise. However, a practical objection to that thinking was that if, for instance, an ocean separated two leopard populations, ethics should prevent us from bringing them in contact only to check if they produce fertile offspring, hence justifying a common-species status. Genetics currently provides a sort of ‘remote check’.

New species, new names

Over the last three decades, the boom of genetics and the global modernisation of environmental policies have fostered alternative criteria to differentiate species, populations, and even individuals. As a result, experts have created a colourful lexicon to label management or conservation units or new taxonomical categories such as that of a subspecies1, e.g., Canis lupus dingo for the wild Australian dog (dingo). These changes have shaken the foundations of taxonomy because several definitions of species (biological, phylogenetic, evolutionary) are forced to live under the umbrella of a common nomenclature. Read the rest of this entry »





Species’ Ability to Forestall Extinction – AudioBoo

8 04 2011

Here’s a little interview I just did on the SAFE index with ABC AM:

Not a bad job, really.

And here’s another one from Radio New Zealand:

CJA Bradshaw





Big sharks. Big mystery.

9 03 2011

My PhD student, Ana Sequeira, has just written a great little guest blog post for the Environment Institute‘s blog. Given I’m en route to Tasmania for a quick consultancy meeting, I thought I’d let myself off the hook and reproduce the post here. Well done, Ana (and hint to my other students – your time on ConservationBytes.com is coming…).

This week is Seaweek and guest blogger Ana Sequeira describes how whale shark distribution might be shifting according to seasonal environmental predictors.

Ana Sequeira is a PhD student at the University of Adelaide (Global Ecology Group). Her main research interests are to develop models applied to the marine environment to describe key environmental processes, species distribution patterns and ecological interactions.

The main objective of her PhD thesis is to investigate behavioural ecology of whale sharks. She is now trying to understand which environmental variables may affect whale shark distribution.

The whale shark (Rhincodon typus, Smith 1828) is the largest fish in the ocean and can reach more than 12 m in total length. Although little is known about their habitat selection or migration patterns, the whale shark appears to be a highly mobile species. They predictably form near shore aggregations in some coastal locations (e.g. off Ningaloo reef in Western Australia) what makes them the subject of highly lucrative marine ecotourism industries. Also, artisanal and small-scale fisheries for the species still exist in many parts of the tropics.

Since the whale sharks is classified a Vulnerable species (IUCN Red List), understanding their migratory behaviour became of chief importance as they can be travelling from regions where they are protected to regions where they are still harvested. Read the rest of this entry »





S.A.F.E. = Species Ability to Forestall Extinction

8 01 2011

Note: I’ve just rehashed this post (30/03/2011) because the paper is now available online (see comment stream). Stay tuned for the media release next week. – CJAB

I’ve been more or less underground for the last 3 weeks. It has been a wonderful break (mostly) from the normally hectic pace of academic life. Thanks for all those who remain despite the recent silence.

© Ezprezzo.com

But I’m back now with a post about a paper we’ve just had accepted in Frontiers in Ecology and Environment. In my opinion it’s a leap forward in how we measure relative threat risk among species, despite some criticism.

I’ve written in past posts about the ‘magic’ minimum number of individuals that should be in a population to reduce the chance of extinction from random events. The so-called ‘minimum viable population (MVP) size’ is basically the abundance of a (connected) population below which random events take over from factors causing sustained declines (Caughley’s distinction between the ‘declining’ and ‘small’ population paradigms).

Up until the last few years, the MVP size was considered to be a population- or species-specific value, and it required very detailed demographic, genetic and biogeographical data to estimate – not something that biologists tend to have at their fingertips for most high-risk species. However, several papers published by our group (Minimum viable population size and global extinction risk are unrelated, Minimum viable population size: a meta-analysis of 30 years of published estimates and Pragmatic population viability targets in a rapidly changing world) have shown that there is in fact little variation in this number among the best-studied species; both demographic and genetic data support a number of around 5000 to avoid crossing the deadly threshold.

Now the fourth paper in this series has just been accepted (sorry, no link yet, but I’ll let you all know as soon as it is available), and it was organised and led by Reuben Clements, and co-written by me, Barry Brook and Bill Laurance.

The idea is fairly simple and it somewhat amazes me that it hasn’t been implemented before. The SAFE (Species Ability to Forestall Extinction) index is simply the distance a population is (in terms of abundance) from its MVP. In the absence of a species-specific value, we used the 5000-individual threshold. Thus, Read the rest of this entry »








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