It’s not all about temperature for corals

31 05 2017

CB_ClimateChange6_Photo

Three of the coral species studied by Muir (2): (a) Acropora pichoni: Pohnpei Island, Pacific Ocean — deep-water species/IUCN ‘Near threatened’; (b) Acropora divaricate: Maldives, Indian ocean — mid-water species/IUCN ‘Near threatened’; and (c) Acropora gemmifera: Orpheus Island, Australia — shallow-water species/IUCN ‘Least Concern’. The IUCN states that the 3 species are vulnerable to climate change (acidification, temperature extremes) and demographic booms of the invading predator, the crown-of-thorns starfish Acanthaster planci. Photos courtesy of Paul Muir.

Global warming of the atmosphere and the oceans is modifying the distribution of many plants and animals. However, marine species are bound to face non-thermal barriers that might preclude their dispersal over wide stretches of the sea. Sunlight is one of those invisible obstacles for corals from the Indian and Pacific Oceans.

If we were offered a sumptuous job overseas, our professional success in an unknown place could be limited by factors like cultural or linguistic differences that have nothing to do with our work experience or expertise. If we translate this situation into biodiversity terms, one of the best-documented effects of global warming is the gradual dispersal of species tracking their native temperatures from the tropics to the poles (1). However, as dispersal progresses, many species encounter environmental barriers that are not physical (e.g., a high mountain or a wide river), and whose magnitude could be unrelated to ambient temperatures. Such invisible obstacles can prevent the establishment of pioneer populations away from the source.

Corals are ideal organisms to study this phenomenon because their life cycle is tightly geared to multiple environmental drivers (see ReefBase: Global Information System for Coral Reefs). Indeed, the growth of a coral’s exoskeleton relies on symbiotic zooxanthellae (see video and presentation), a kind of microscopic algae (Dinoflagellata) whose photosynthetic activity is regulated by sea temperature, photoperiod and dissolved calcium in the form of aragonite, among other factors.

Read the rest of this entry »





Job: Research Associate in Eco-epidemiological modelling

3 03 2017
myxo-rabbit

European rabbit infected with myxomatosis

Earlier this week I advertised two new PhD scholarships in palaeo-ecological modelling. Now we are pleased to advertise a six-month Research Associate position in eco-epidemiological modelling.

The position will be based in the School of Biological Sciences at Flinders University. Flinders University offers a dynamic research environment that explores the continuum of environmental and evolutionary research from the ancient to modern ecology. The School of Biological Sciences is an integrated community researching and teaching biology, and has a long history of science innovation.

Project background

Since 1996, Biosecurity South Australia has been running a capture-mark-recapture study on a European rabbit (Oryctolagus cuniculus) population located at Turretfield (~ 50 km north of Adelaide). Now into the 21st year, this is one of the world’s longest studies of its kind. Approximately every 8 weeks cage traps are reset and the population trapped over five days, with the captured rabbits weighed, sexed, tagged and blood-sampled. The study was established to investigate the epidemiology and efficacy of the two imported rabbit biocontrol agents, rabbit haemorrhagic disease virus (RHDV) and myxomatosis. To date, from 119 formal trapping events and RHDV-outbreak carcass-sampling trips, > 4500 rabbits have been monitored with > 8700 cELISA RHDV antibody tests and 7500 IgG, IgM and IgA RHDV antibody tests on sera (similarly for myxomatosis), and 111 RHDV-specific polymerase chain reaction (PCR) analyses run on tissue samples of the sampled rabbits. This represents an unparalleled dataset on rabbit survival, population fluctuations and disease dynamics. Read the rest of this entry »





Boreal forest on the edge of a climate-change tipping point

15 11 2016

As some know, I dabble a bit in the carbon affairs of the boreal zone, and so when writer Christine Ottery interviewed me about the topic, I felt compelled to reproduce her article here (originally published on EnergyDesk).

A view of the Waswanipi-Broadback Forest in the Abitibi region of Northern Quebec, one of the last remaining intact Boreal Forests in the province (source: EnergyDesk).

A view of the Waswanipi-Broadback forest in the Abitibi region of northern Quebec, one of the last remaining intact boreal forests in the Canadian province (source: EnergyDesk).

The boreal forest encircles the Earth around and just below the Arctic Circle like a big carbon-storing hug. It can mostly be found covering large swathes of Russia, Canada and Alaska, and some Scandinavian countries.

In fact, the boreal – sometimes called by its Russian name ‘taiga’ or ‘Great Northern Forest’ – is perhaps the biggest terrestrial carbon store in the world.

So it’s important to protect in a world where we’re aiming for 1.5 or – at worst – under two degrees celsius of global warming.

“Our capacity to limit average global warming to less than 2 degrees is already highly improbable, so every possible mechanism to reduce emissions must be employed as early as possible. Maintaining and recovering our forests is part of that solution,” Professor Corey Bradshaw, a leading researcher into boreal forests based at the University of Adelaide, told Energydesk.

It’s not that tropical rainforests aren’t important, but recent research led by Bradshaw published in Global and Planetary Change shows that that there is more carbon held in the boreal forests than previously realised.

But there’s a problem. Read the rest of this entry »





Massive yet grossly underestimated global costs of invasive insects

4 10 2016
Portrait of a red imported fire ant, Solenopsis invicta. This species arrived to the southeastern United States from South America in the 1930s. Specimen from Brackenridge Field Laboratory, Austin, Texas, USA. Public domain image by Alex Wild, produced by the University of Texas "Insects Unlocked" program.

Portrait of a red imported fire ant Solenopsis invicta. This species arrived to the southeastern USA from South America in the 1930s. Specimen from Brackenridge Field Laboratory, Austin, Texas, USA. Public domain image by Alex Wild, produced by the University of Texas “Insects Unlocked” program.

As many of you already know, I spent a good deal of time in France last year basking in the hospitality of Franck Courchamp and his vibrant Systematic Ecology & Evolution lab at Université Paris-Sud. Of course, I had a wonderful time and was sad to leave in the end, but now I have some hard evidence that I wasn’t just eating cheese and visiting castles. I was actually doing some pretty cool science too.

Financed by BNP-Paribas and Agence Nationale de Recherche, the project InvaCost was designed to look at the global impact of invasive insects, including projections of range dynamics under climate change and shifting trade patterns. The first of hopefully many papers is now out.

Just published in Nature Communications, I am proud that many months of hard work by a brilliant team of ecologists, epidemiologists and economists has culminated in this article entitled Massive yet grossly underestimated costs of invasive insects, which in my opinion is  the first robust analysis of its kind. Despite some previous attempts at estimating the global costs of invasive species1-4 (which have been largely exposed as guesswork and fantasy5-10), our paper rigorously treats the economic cost estimates and categorises them into ‘reproducible’ and ‘irreproducible’ categories.

Lymantria

Gypsy moth (Lymantria dispar) adult. Dimitri Geystor (France)

What we found was sobering. If we look at just ‘goods and services’ affected by invasive insects, the annual global costs run at about US$70 billion. These include agricultural, forestry and infrastructure damages, as well as many of the direct costs of clean-up and eradication, and the indirect costs of prevention. When you examine that number a little more closely and only include the ‘reproducible’ studies, the total annual costs dip to about US$25 billion, meaning that almost 65% of the costs recorded are without any real empirical support. Scary, especially considering how much credence people put on previously published global ‘estimates’ (for example, see some citation statistics here).

Coptotermes_formosanus

Formosan subterranean termite Coptotermes formosanus by Scott Bauer, US Department of Agriculture, Agricultural Research Service

There’s a great example to illustrate this. If you take it at face value, the most expensive invasive insect in the world is the Formosan subterranean termite Coptotermes formosanus estimated at US$30.2 billion/yr globally. However, that irreproducible estimate is based on a single non-sourced value of US$2.2 billion per year for the USA, a personal communication supporting a ratio of 1:4 of control:repair costs in a single US city (New Orleans), and an unvalidated assumption that the US costs represent 50% of the global total.

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Rich and stable communities most vulnerable to change

16 08 2016

networkI’ve just read an interesting new study that was sent to me by the lead author, Giovanni Strona. Published the other day in Nature Communications, Strona & Lafferty’s article entitled Environmental change makes robust ecological networks fragile describes how ecological communities (≈ networks) become more susceptible to rapid environmental changes depending on how long they’ve had to evolve and develop under stable conditions.

Using the Avida Digital Evolution Platform (a free, open-source scientific software platform for doing virtual experiments with self-replicating and evolving computer programs), they programmed evolving host-parasite pairs in a virtual community to examine how co-extinction rate (i.e., extinctions arising in dependent species — in this case, parasites living off of hosts) varied as a function of the complexity of the interactions between species.

Starting from a single ancestor digital organism, the authors let evolve several artificial life communities for hundred thousands generation under different, stable environmental settings. Such communities included both free-living digital organisms and ‘parasite’ programs capable of stealing their hosts’ memory. Throughout generations, both hosts and parasites diversified, and their interactions became more complex. Read the rest of this entry »





Shadow of ignorance veiling society despite more science communication

19 04 2016

imagesI’ve been thinking about this post for a while, but it wasn’t until having some long, deep chats today with staff and students at Simon Fraser University‘s Department of Biological Sciences (with a particular hat-tip to the lovely Nick Dulvy, Isabelle Côté & John Reynolds) that the full idea began to take shape in my brain. It seems my presentation was a two-way street: I think I taught a few people some things, and they taught me something back. Nice.

There’s no question at all that science communication has never before been so widespread and of such high quality. More and more scientists and science students are now blogging, tweeting and generally engaging the world about their science findings. There is also an increasing number of professional science communication associations out there, and a growing population of professional science communicators. It is possibly the best time in history to be involved in the generation and/or communication of scientific results.

Why then is the public appreciation, acceptance and understanding of science declining? It really doesn’t make much sense if you merely consider that there has never been more good science ‘out there’ in the media — both social and traditional. For the source literature itself, there has never before been as many scientific journals, articles and even scientists writing. Read the rest of this entry »





Biowealth

24 02 2016

frogWhile I’ve blogged about this before in general terms (here and here), I thought it wise to reproduce the (open-access) chapter of the same name published in late 2013 in the unfortunately rather obscure book The Curious Country produced by the Office of the Chief Scientist of Australia. I think it deserves a little more limelight.

As I stepped off the helicopter’s pontoon and into the swamp’s chest-deep, tepid and opaque water, I experienced for the first time what it must feel like to be some other life form’s dinner. As the helicopter flittered away, the last vestiges of that protective blanket of human technological innovation flew away with it.

Two other similarly susceptible, hairless, clawless and fangless Homo sapiens and I were now in the middle of one of the Northern Territory’s largest swamps at the height of the crocodile-nesting season. We were there to collect crocodile eggs for a local crocodile farm that, ironically, has assisted the amazing recovery of the species since its near-extinction in the 1960s. Removing the commercial incentive to hunt wild crocodiles by flooding the international market with scar-free, farmed skins gave the dwindling population a chance to recover.

redwoodConservation scientists like me rejoice at these rare recoveries, while many of our fellow humans ponder why we want to encourage the proliferation of animals that can easily kill and eat us. The problem is, once people put a value on a species, it is usually consigned to one of two states. It either flourishes as do domestic crops, dogs, cats and livestock, or dwindles towards or to extinction. Consider bison, passenger pigeons, crocodiles and caviar sturgeon.

As a conservation scientist, it’s my job not only to document these declines, but to find ways to prevent them. Through careful measurement and experiments, we provide evidence to support smart policy decisions on land and in the sea. We advise on the best way to protect species in reserves, inform hunters and fishers on how to avoid over-harvesting, and demonstrate the ways in which humans benefit from maintaining healthy ecosystems. Read the rest of this entry »