The Effective Scientist

22 03 2018

final coverWhat is an effective scientist?

The more I have tried to answer this question, the more it has eluded me. Before I even venture an attempt, it is necessary to distinguish the more esoteric term ‘effective’ from the more pedestrian term ‘success’. Even ‘success’ can be defined and quantified in many different ways. Is the most successful scientist the one who publishes the most papers, gains the most citations, earns the most grant money, gives the most keynote addresses, lectures the most undergraduate students, supervises the most PhD students, appears on the most television shows, or the one whose results improves the most lives? The unfortunate and wholly unsatisfying answer to each of those components is ‘yes’, but neither is the answer restricted to the superlative of any one of those. What I mean here is that you need to do reasonably well (i.e., relative to your peers, at any rate) in most of these things if you want to be considered ‘successful’. The relative contribution of your performance in these components will vary from person to person, and from discipline to discipline, but most undeniably ‘successful’ scientists do well in many or most of these areas.

That’s the opening paragraph for my new book that has finally been release for sale today in the United Kingdom and Europe (the Australasian release is scheduled for 7 April, and 30 April for North America). Published by Cambridge University Press, The Effective ScientistA Handy Guide to a Successful Academic Career is the culmination of many years of work on all the things an academic scientist today needs to know, but was never taught formally.

Several people have asked me why I decided to write this book, so a little history of its genesis is in order. I suppose my over-arching drive was to create something that I sincerely wish had existed when I was a young scientist just starting out on the academic career path. I was focussed on learning my science, and didn’t necessarily have any formal instruction in all the other varied duties I’d eventually be expected to do well, from how to write papers efficiently, to how to review properly, how to manage my grant money, how to organise and store my data, how to run a lab smoothly, how to get the most out of a conference, how to deal with the media, to how to engage in social media effectively (even though the latter didn’t really exist yet at the time) — all of these so-called ‘extra-curricular’ activities associated with an academic career were things I would eventually just have to learn as I went along. I’m sure you’ll agree, there has to be a better way than just muddling through one’s career picking up haphazard experience. Read the rest of this entry »





Good English and the scientific career: hurdles for non-native English speakers

13 02 2019

New post from Frédérik Saltré originally presented on the GE.blog.


It’s no secret that to be successful in academia, it’s not enough just to be a good scientist — being able to formulate and test hypotheses. You also need to be able to communicate that science effectively.

This implies a good command of the English language for anyone who wants a career in science. Mastering English (or not) will directly affect your work opportunities such as publishing, establishing networks at conferences, taking leadership of working groups, contributing to lab meetings (there is nothing worse than feeling left out of a conversation because of language limitations), and so forth.

But when it comes to language skills, not everyone is created equal because those skills mostly depend on a person’s background (e.g., learning English as a child or later in life), cultural reluctance, fear of making mistakes, lack of confidence, or simply brain design — this last component might offend some, but it appears that some people just happen to have the specific neuronal pathways to learn languages better than others. Whatever the reason, the process of becoming a good scientist is made more difficult if you happen not to have that specific set of neuronal pathways, even though not being a native English speaker does not prevent from being academically successful.

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Politics matter: undoing conservation progress in the land of the dodo

4 02 2019

The island of Mauritius is known, particularly in conservation circles, for the ill-fated extinction of the dodo, but also for its many conservation success stories. These include the recovery of emblematic birds such as the Mauritius kestrel (Falco punctatus) and the pink pigeon (Nesoenas mayeri) that narrowly avoided extinction several decades ago. 

Mauritius (greater Mascarene) flying fox Pteropus niger

Behind this veil of achievements, however, local political realities are increasingly making the protection and management of Mauritian biodiversity more complex and challenging as new conservation issues emerge.

Emergence of human-wildlife conflict

In the midst of the third government-led mass cull of the Endangered Mauritian flying fox (Pteropus niger) in 2018, a paper published in the Journal for Nature Conservation shed light on the events that led to the government’s choice to do the first two mass culls of the Mauritian flying fox in 2015 and 2016. Documentation of human-wildlife conflict in Mauritius is relatively new, as noted by the authors, but provides a unique case study.

Given that the mass-culling opted for did not increase fruit growers’ profits (in fact, fruit production dropped substantially after the mass-culls) and that the flying fox, a keystone species for the native biodiversity, became more threatened with extinction following the mass culls, it appears that Mauritius provides a rare opportunity to study what precisely should be avoided when trying to resolve such a HWC [Human-wildlife conflict],

Florens & Bader (2019)

Indeed, to mitigate rising conflicts between fruit farmers and the Mauritian flying fox, the Mauritian government opted in 2006 to cull this threatened species (only six individuals were culled at the time). Despite disputes over the population size of the Mauritian flying fox and the extent of damage it caused to commercial fruit growers, as well as scientific arguments against the cull, culling continues to be the preferred approach. 

The law that kills threatened wildlife 

This focus on culling as a solution contributed to a legal amendment in October 2015 that now facilitates the population control of any species of wildlife, irrespective of its origin and its conservation status. The Native Terrestrial Biodiversity and National Parks Bill was passed on 20 October 2015, just two weeks after the government announced its plan to cull 18,000 threatened native bats.

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Thirsty forests

1 02 2019

Climate change is one ingredient of a cocktail of factors driving the ongoing destruction of pristine forests on Earth. We here highlight the main physiological challenges trees must face to deal with increasing drought and heat.

Forests experiencing embolism after a hot drought. The upper-left pic shows Scots (Pinus sylvestris) and black (P. nigra) pines in Montaña de Salvador (Espuñola, Barcelona, Spain) during a hot Autumn in 2015 favouring a massive infestation by pine processionary caterpillars (Thaumetopoea pityocampa) and tree mortality the following year (Lluís Brotons/CSIC in InForest-CREAF-CTFC). To the right, an individual holm oak (Quercus ilex) bearing necrotic branches in Plasencia (Extremadura, Spain) during extreme climates from 2016 to 2017, impacting more than a third of the local oak forests (Alicia Forner/CSIC). The lower-left pic shows widespread die-off of trembling aspen (Populus tremuloides) from ‘Aspen Parkland’ (Saskatchewan, Canada) in 2004 following extreme climates in western North America from 2001 to 2002 (Mike Michaelian/Canadian Forest Service). To the right, several dead aspens near Mancos (Colorado, USA) where the same events hit forests up to one-century old (William Anderegg).

A common scene when we return from a long trip overseas is to find our indoor plants wilting if no one has watered them in our absence. But … what does a thirsty plant experience internally?

Like animals, plants have their own circulatory system and a kind of plant blood known as sap. Unlike the phloem (peripheral tissue underneath the bark of trunks and branches, and made up of arteries layered by live cells that transport sap laden with the products of photosynthesis, along with hormones and minerals — see videos here and here), the xylem is a network of conduits flanked by dead cells that transport water from the roots to the leaves through the core of the trunk of a tree (see animation here). They are like the pipes of a building within which small pressure differences make water move from a collective reservoir to every neighbours’ kitchen tap.

Water relations in tree physiology have been subject to a wealth of research in the last half a decade due to the ongoing die-off of trees in all continents in response to episodes of drought associated with temperature extremes, which are gradually becoming more frequent and lasting longer at a planetary scale (1). 

Embolised trees

During a hot drought, trees must cope with a sequence of two major physiological challenges (2, 3, 4). More heat and less internal water increase sap tension within the xylem and force trees to close their stomata (5). Stomata are small holes scattered over the green parts of a plant through which gas and water exchanges take place. Closing stomata means that a tree is able to reduce water losses by transpiration by two to three orders of magnitude. However, this happens at the expense of halting photosynthesis, because the main photosynthetic substrate, carbon dioxide (CO2), uses the same path as water vapour to enter and leave the tissues of a tree.

If drought and heat persist, sap tension reaches a threshold leading to cavitation or formation of air bubbles (6). Those bubbles block the conduits of the xylem such that a severe cavitation will ultimately cause overall hydraulic failure. Under those conditions, the sap does not flow, many parts of the tree dry out gradually, structural tissues loose turgor and functionality, and their cells end up dying. Thus, the aerial photographs showing a leafy blanket of forest canopies profusely coloured with greys and yellows are in fact capturing a Dantesque situation: trees in photosynthetic arrest suffering from embolism (the plant counterpart of a blood clot leading to brain, heart or pulmonary infarction), which affects the peripheral parts of the trees in the first place (forest dieback).

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Higher diversity begets more ecosystem services

25 01 2019
© CJA Bradshaw

Back in 2013, an interesting paper by a group of mainly Swedish ecologists (including one of my former collaborators, Professor Jon Moen of Umeå University) showed how increasing tree species diversity in boreal forests generally increased biomass production. While this is really not news to ecologists in general — for we now have an abundance of data showing that more species diversity leads to higher ecosystem productivity — it certainly didn’t please many foresters whose job it is generally to make trees grow faster so that companies can harvest more timber or pulp.

Well, Jon kindly just emailed me the group’s latest contribution to the puzzle, but this time they looked at several different ‘ecosystem services’ that (mainly boreal) forests provide — things like berry production, topsoil carbon storage, game (hunted mammals) production, the species richness of understory species, and the amount of dead wood — and found that not only does diversity matter, but also the relative abundance of each tree species in the forest mix.

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We need a Revegetation Council

14 01 2019
planting trees

As I have discussed before, the greatest threatening process to biodiversity in South Australia today is past and ongoing clearing of native vegetation. So, arresting further vegetation clearing, and restoring previously cleared land to functional native-vegetation communities are easily the highest priorities across the entire State.

Despite some valiant attempts across South Australia to revegetate previously cleared areas1, the haphazard approach to reforestation in South Australia means that we are unlikely to be maximising ecological function and providing the best habitats for native biodiversity. Several improvements in this regard can be made:

(i) Establish a State Register of past, ongoing, and planned revegetation projects, including data on the proponents, area revegetated, species planted, number of individuals planted for each species, monitoring in place (e.g., plant survival, other species using the restored habitat, etc.), and costs (actual or projected). Such a State Register would allow for a more regional coordination of future revegetation projects to suggest potentially more ecologically useful approaches. This could include identifying the most locally suitable species to plant, maximising the area of existing native habitat or restored fragments by planting adjacent to these, joining isolated islands of habitat to increase connectivity, or even to create more efficient projects by combining otherwise independent proponents (e.g., adjacent landholders).

(ii) Establish a State Revegetation Council that uses data from the Register to prioritise projects, enhance collaboration, and suggest improvements in design and placement according to the principles mentioned above. The Council could also help to coordinate monitoring of progress and ecological outcomes at the landscape scale. A similar State Register for Wetland Restoration and a relevant Council could be established in a similar manner, emphasising the conservation and restoration of smaller wetlands with more unique, endemic plant species. Likewise, both Councils could ideally assist in coordinating non-profit and private organisations in terms of their revegetation priorities, as well as coordinate with conservation covenants(see below) for private landholders.

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Cartoon guide to biodiversity loss LII

2 01 2019

The first set of six biodiversity cartoons for 2019 to usher in the New Year. See full stock of previous ‘Cartoon guide to biodiversity loss’ compendia here.


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Influential conservation ecology papers of 2018

17 12 2018

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For the last five years I’ve published a retrospective list of the ‘top’ 20 influential papers of the year as assessed by experts in F1000 Prime — so, I’m doing so again for 2018 (interesting side note: six of the twenty papers highlighted here for 2018 appear in Science magazine). See previous years’ posts here: 2017, 20162015, 2014, and 2013.

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