Fancy a pangolin infected with coronavirus? Apparently, many people do

30 12 2021

The logic of money contradicts the logic of species conservation and human health. As illegal trade has driven pangolins to near extinction, their hunting and market value has kept increasing ― even when we have known that they act as coronavirus reservoirs in the middle of the Covid-19 pandemic.

Sunda pangolin (Manis javanica) in a monsoon forest (Sumba Island, Indonesia). With adult weights up to 10 kg and body lengths around half a metre, these animals are mostly solitary and nocturnal, feed on ants and termites, and love tree climbing using bark hollows to shelter and give birth to singletons. The species occurs across mainland and islands of South East Asia, and became ‘Endangered’ in 2008 and ‘Critically Endangered’ in 2014, following a 80% decline in the last 20 years due to hunting and poaching. It has been the most heavily trafficked Asian species, and the IUCN’s assessment states: “… the incentives for harvesting and illegally trading in the species are universally high based on the high financial value of pangolin parts and derivatives”. Captive breeding is unlikely to deter wild collection because (among other reasons) farming costs are high (more so on a large scale) and, even if the species could be traded legally, wild versus farmed pangolin products and individuals are difficult to distinguish (23). Photo courtesy of Michael Pitts

Urbanites are attracted to exotic species, materials, and places. Our purchasing power seems to give us the right to buy any ‘object’ that we can pay for, no matter how exotic the object might be. In such a capitalist rationale, it is no surprise that > 150 thousand illegal cargos with wild animals and plants have been confiscated in 149 countries over the last two decades, moving some 6000 species from one place of the planet to another (1).

Social networks show people interacting with all kinds of fauna, creating the illusion that any animal can become a pet (2). And there’s a multi-$billion market of wildlife for a diverse array of uses including collecting, food, ornamentation, leisure, clothing and medicine (3-5). The paradox is that the rarer a species is, the higher its market value runs and the more lucrative selling it turns out to be, leading to more exploitation and rocketing extinction risk (6).

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Cartoon guide to biodiversity loss LXIX

23 12 2021

Here is the final set of biodiversity cartoons for 2021, with some à propos seasonal content. See full stock of previous ‘Cartoon guide to biodiversity loss’ compendia here.


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Remote areas not necessarily safe havens for biodiversity

16 12 2021

The intensity of threats to biodiversity from human endeavour becomes weaker as the distance to them increases.


As you move away from the big city to enjoy the countryside, you’ll notice the obvious increase in biodiversity. Even the data strongly support this otherwise subjective perception — there is a positive correlation between the degree we destroy habitat, harvest species, and pollute the environment, and the distance from big cities.

Remote locations are therefore usually considered safe havens and potential reservoirs for biodiversity. But our new study published recently in Nature Communications shows how this obvious pattern depicts only half of the story, and that global conservation management and actions might benefit from learning more about the missing part.

Communities are not just lists of individual species. Instead, they consist of complex networks of ecological interactions linking interdependent species. The structure of such networks is a fundamental determinant of biodiversity emergence and maintenance. However, it also plays an essential role in the processes of biodiversity loss. The decline or disappearance of some species might have detrimental —often fatal — effects on their associates. For example, a parasite cannot survive without its hosts, as much as a predator will starve without prey, or a plant will not reproduce without pollinators.

Events where a species disappears following the loss of other species on which it depends are known as co-extinctions, and they are now recognised as a primary driver of the ongoing global biodiversity crisis. The potential risk stemming from ecological dependencies is a major concern for all ecological systems.

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Extinct megafauna prone to ancient hunger games

14 12 2021

I’m very chuffed today to signal the publication of what I think is one of the most important contributions to the persistent conundrum surrounding the downfall of Australia’s megafauna many tens of millennia ago.

Diprotodon optimum. Artwork by palaeontologist and artist Eleanor (Nellie) Pease (commissioned by the ARC Centre of Excellence for Australian Biodiversity and Heritage)

Sure, I’m obviously biased in that assessment because it’s a paper from our lab and I’m a co-author, but if readers had any inkling of the work that went into this paper, I think they might consider adopting my position. In addition, the injection of some actual ecology into the polemic should be viewed as fresh and exciting.

Having waded into the murky waters of the ‘megafauna debate’ for about a decade now, I’ve become a little sensitive to even a whiff of binary polemic surrounding their disappearance in Australia. Acolytes of the climate-change prophet still beat their drums, screaming for the smoking gun of a spear sticking out of a Diprotodon‘s skull before they even entertain the notion that people might have had something to do with it — but we’ll probably never find one given the antiquity of the event (> 40,000 years ago). On the other side are the blitzkriegers who declaim that human hunting single-handedly wiped out the lot.

Well, as it is for nearly all extinctions, it’s actually much more complicated than that. In the case of Sahul’s megafauna disappearances, both drivers likely contributed, but the degree to which both components played a part depends on where and when you look — Fred Saltré demonstrated that elegantly a few years ago.

Palorchestes. Artwork by palaeontologist and artist Eleanor (Nellie) Pease (commissioned by the ARC Centre of Excellence for Australian Biodiversity and Heritage)

So, why does the polemic persist? In my view, it’s because we have largely depended on the crude comparison of relative dates to draw our conclusions. That is, we look to see if some climate-change proxy shifted in any notable way either before or after an inferred extinction date. If a particular study claims evidence that a shift happened before, then it concludes climate change was the sole driver. If a study presents evidence that a shift happened after, then humans did it. Biases in geochronological inference (e.g., spatial, contamination), incorrect application of climate proxies, poor taxonomic resolution, and not accounting for the Signor-Lipps effect all contribute unnecessarily to the debate because small errors or biases can flip relative chronologies on their head and push conclusions toward uncritical binary outcomes. The ‘debate’ has been almost entirely grounded on this simplistically silly notion.

This all means that the actual ecology has been either ignored or merely made up based on whichever pet notion of the day is being proffered. Sure, there are a few good ecological inferences out there from some damn good modellers and ecologists, but these have all been greatly simplified themselves. This is where our new paper finally takes the ecology part of the problem to the next level.

Led by Global Ecology and CABAH postdoctoral fellow, John Llewelyn, and guided by modelling guru Giovanni Strona at University of Helsinki, the paper Sahul’s megafauna were vulnerable to plant-community changes due to their position in the trophic network has just been published online in Ecography. Co-authors include Kathi Peters, Fred Saltré, and me from Flinders Global Ecology, Matt McDowell and Chris Johnson from UTAS, Daniel Stouffer from University of Canterbury (NZ), and Sara de Visser from University of Groningen (Netherlands).

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Animating models of ecological change

6 12 2021

Flinders University Global Ecology postdoc, Dr Farzin Shabani, recently created this astonishing video not only about the results of his models predicting vegetation change in northern Australia as a function of long-term (tens of thousands of years) climate change, but also on the research journey itself!

He provides a brief background to how and why he took up the challenge:


Science would be a lot harder to digest without succinct and meaningful images, graphs, and tables. So, being able to visualise both inputs and outputs of scientific models to cut through the fog of data is an essential element of all science writing and communication. Diagrams help us understand trends and patterns much more quickly than do raw data, and they assist with making comparisons.

During my academic career, I have studied many different topics, including natural hazards (susceptibility & vulnerability risks), GIS-based ensemble modelling, climate-change impacts, environmental modelling at different temporal and spatial scales, species-distribution modelling, and time-series analysis. I use a wide range of graphschartsplotsmaps and tables to transfer the key messages.

For my latest project, however, I was given the opportunity to make a short animation and visualise my results and the journey itself. I think that my animation inspires a sense of wonder, which is among the most important goals of science education. I also think that my animation draws connections to real-life problems (e.g., ecosystem changes as a product of climate change), and also develops an appreciation of the scientific process itself.

Take a look at let me know what you think!

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