A world of hurt

21 04 2010

Given it’s only a little under 3 weeks away, I thought I’d advertise an upcoming free public lecture I’m giving for the University of Adelaide‘s highly popular Research Tuesdays programme.

The Research Tuesdays team have done a fantastic job of putting together the associated promotional material, so I’m more or less going to reproduce it here.

The topic is about the global-scale evidence for declining human health from environmental degradation – it’s new research that I haven’t yet published, and so it’ll be exciting to start disseminating the amazing results my colleagues and I have found in a public forum.

So join us on 11 May at the University of Adelaide for what I promise will be an interesting (if not frightening) public lecture. Details below. Read the rest of this entry »





The spillover effect

18 04 2010

© everlessaday

The so-called ‘spillover effect’ is a long-standing debate in conservation ecology. The idea is relatively simple – put in a marine reserve (or, no-take zone, park, whatever you wish to call it as long as it restricts blanket over-fishing) and the area around the reserve eventually profits from the nearby over-production of fish (and other taxa). The idea is very attractive because even if you’re thick enough not to understand the absolute necessity of marine reserves in our age of mass, global over-exploitation, at least you might have enough grey matter to appreciate the value of more fish ‘spilling over’ into your favourite fishing area. More proposed marine reserves have been sold to the more Luddite ‘stakeholder’ this way than I care to count.

However, as attractive an idea it was, early on in the marine reserve literature (i.e., the early Devonian 1990s), there was limited (Rowley 1994; Willis et al. 2003) or only circumstantial evidence (Russ & Alcala 1996; Roberts et al. 2005) for the effect. Indeed, many have suggested that the spillover benefit, if present, depends entirely on the size of the reserve and whether adjacent areas are managed at all (Allison et al. 1996; McClanahan & Mangi 2000). Others have even suggested that marine reserves can displace fishing effort into smaller areas and change local community structure enough to facilitate invasion by exotic species (Kellner & Hastings 2009).

It is happier time now that we have more than ample evidence that marine reserves do in fact result in species spillover (e.g.,Roberts et al. 2001; Russ et al. 2004; Abesamis & Russ 2005). So it is not with any great claims of novelty that I highlight Garry Russ & Angel Alcala’s latest paper, Enhanced biodiversity beyond marine reserve boundaries: the cup spilleth-over; rather, it’s how they quantify the long-term evidence, the mechanisms for how spillover occurs and how the community changes that they deserve a mention. Read the rest of this entry »





Conservation jobs at the University of Adelaide

13 04 2010

I’m posting the advertisements for two new conservation jobs in the Global Ecology Group at the University of Adelaide.

This Australian Research Council-funded Discovery Project seeks to determine whether functional forms of spatially explicit population dynamics are generalisable across taxa with similar attributes and range limiting factors. By considering the effects of multiple interacting factors (biotic and abiotic) on the demographic determinants of species’ habitat suitability and geographic distributional limits, the research will provide a foundation on which to develop adaptive conservation strategies in response to the anticipated impacts of global change; examine the complexities and potentially irreducible uncertainties in forecasting and managing biodiversity; and identify limitations associated with different modelling approaches. Read the rest of this entry »





The maggot of the plant world – mangroves

12 04 2010

I don’t know how many of my readers have waded through a mangrove swamp before – if you have, you’ll know it’s no ‘walk in the park’. They are generally mosquito-infested with waist-deep mud, have more creepy-crawlies than you can poke a stick at, and in some places (such as my former stomping ground, the Northern Territory of Australia) are down-right dangerous due to lovelies such as saltwater crocodiles.

But, most people probably don’t know just how important mangroves are. Just like the maggot who can sicken the hardiest of individual, under-appreciated mangroves provide major ecosystem services.

For example, did you know that mangroves:

  1. Protect inland human communities from damage caused by coastal erosion and storms?
  2. Provide critical habitat for a variety of terrestrial, estuarine and marine species? Indeed, it has been estimated that ~80 % of fish catches globally depend directly or indirectly  on mangroves.
  3. Are a source and sink for nutrients and sediments for other inshore marine habitats including seagrass beds and coral reefs?
  4. Protect coasts from floods?
  5. Process nutrient and organic matter?
  6. Control sediment?
  7. Provide at least US$1.6 billion per year in ecosystem services worldwide?
  8. Sequester up to 25.5 million tonnes of carbon per year?
  9. Provide more than 10% of essential organic carbon to the global oceans?
  10. Occupy only 0.12% of the world’s total land area?

Pretty staggering, no?

So, even if you don’t like them, it’s difficult to deny that they’re important.

But, like almost every other habitats worldwide, mangroves are on the big downward slide. In a new paper in PLoS One by Polidoro & colleagues entitled The loss of species: mangrove extinction risk and geographic areas of global concern, the authors not only highlight the above benefits, they quantify just how badly the 70 mangrove species around the world are faring. Read the rest of this entry »





China’s insatiable lust for tropical timber

4 04 2010

If you’ve been following ConservationBytes.com for the past few weeks, you’ll know that William Laurance was in town and gave a fantastic set of talks (download podcasts here). As a parting gift, he put together a brief post on one huge aspect of the tropical deforestation crisis we know face. Thanks, Bill.

© AAAS

I greatly enjoyed my recent visit to the University of Adelaide, and especially want to thank my host, Corey Bradshaw, for showing me a wonderful time there.

Corey asked me to contribute a brief blog for ConservationBytes.com and so I thought I’d highlight a paper in Science last week by my old friend Jianguo “Jack” Liu at Michigan State University. In his paper China’s road to sustainability, Jack describes the battle to improve environmental sustainability in China–a battle that is not progressing very well, all factors considered.

China’s explosive economic growth and environmental deterioration is also affecting other countries, especially those with timber, minerals or other resources that China wants. Today, more than half of the timber shipped anywhere in the world is destined for China–some 45 million m3 per year, an incredible total. Read the rest of this entry »





‘Amplify’ and ‘Lungs’ – William Laurance podcasts

1 04 2010

William Laurance has been here at the University of Adelaide for the past 4 days and has just left. He had a marathon talk-fest while here, and a very full social calendar. I bet he’s happy he’s back home so he can wind down a little.

Just a quick post to provide the links to the podcasts of his two public talks: “Amplify your Voice” and “Lungs of the Planet”, plus a radio interview he did yesterday on ABC.

The first public talk was split into two parts:

  1. How to be more prolific: strategies for writing and publishing scientific papers
  2. Further ways to maximise your scientific impact- interacting with the popular media and how to promote yourself

Part 1 MP3

Part 1 Slideshow

Part 2 MP3

Part 2 Slideshow

The other main talk ‘Lungs of our Planet’ was also in two bits (a more academically orientated one on Monday, and the public lecture on Wednesday):

  1. Emerging Challenges for Environmental Research in the Tropics
  2. Diagnosis critical – the lungs of the planet

Part 1 MP3

Part 1 Slideshow

Part 2 MP3

Part 2 Slideshow

And finally, the radio interview he did on ABC 891 Afternoons with Carole Whitelock (audio file courtesy of ABC 891, Afternoons with Carole Whitelock):

Enjoy!

CJA Bradshaw

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Inbreeding does matter

29 03 2010

I’ve been busy with Bill Laurance visiting the University of Adelaide over the last few days, and will be so over the next few as well (and Bill has promised us a guest post shortly), but I wanted to get a post in before the week got away on me.

I’ve come across what is probably the most succinct description of why inbreeding depression is an important aspect of extinctions in free-ranging species (see also previous posts here and here) by Mr. Conservation Genetics himself, Professor Richard Frankham.

Way back in the 1980s (oh, so long ago), Russ Lande produced a landmark paper in Science arguing that population demography was a far more important driver of extinctions than reduced genetic diversity per se. He stated:

“…demography may usually be of more immediate importance than population genetics in determining the minimum viable size of wild populations”

We now know, however, that genetics in fact DO matter, and no one could put it better than Dick Frankham in his latest commentary in Heredity.

I paraphrase some of his main points below:

  • Controversy broke out in the 1970 s when it was suggested that inbreeding was deleterious for captive wildlife, but Ralls and Ballou (1983) reported that 41/44 mammal populations had higher juvenile mortality among inbred than outbred individuals.
  • Crnokrak and Roff (1999) established that inbreeding depression occurred in 90 % of the datasets they examined, and was similarly deleterious across major plant and animal taxa.
  • They estimated that inbreeding depression in the wild has approximately seven times greater impact than in captivity.
  • It is unrealistic to omit inbreeding depression from population viability analysis models.
  • Lande’s contention was rejected when Spielman et al. (2004) found that genetic diversity in 170 threatened taxa was lower than in related non-threatened taxa

Lande might have been incorrect, but his contention spawned the entire modern discipline of conservation genetics. Dick sums up all this so much more eloquently than I’ve done here, so I encourage you to read his article.

CJA Bradshaw

ResearchBlogging.orgFrankham, R. (2009). Inbreeding in the wild really does matter Heredity, 104 (2), 124-124 DOI: 10.1038/hdy.2009.155

Lande, R. (1988). Genetics and demography in biological conservation Science, 241 (4872), 1455-1460 DOI: 10.1126/science.3420403

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Don’t miss Bill

25 03 2010

Yes, yes, I know I’ve posted only a little under two weeks ago that the venerable William (Bill) Laurance is coming to Adelaide, and anyone even remotely interested in biodiversity conservation would be a fool to miss his talks, and ra, ra, ra…

Well, you would be.

However, I don’t want anyone to miss this opportunity simply because of non-recognition. So I thought it prudent to remind people just how special this visit is, and what a researcher extraordinaire Bill really is. For those not necessarily following the trends in tropical conservation biology (probably not many in Adelaide, at least), you might not necessarily recognise his name.

So, I thought I’d give a little broadsheet of his achievements, Read the rest of this entry »





Classics: Extinction from Climate Change

22 03 2010

© A. Wong

Amidst the mildly annoying, yet functionally irrelevant sensationalism of climate change politics, conservation biologists are taking the problem seriously and attempting to predict (and prevent) extinctions arising from a rapidly heating planet (see BraveNewClimate.com‘s excellent summary here, as well as his general category of ‘ecological impacts of climate change‘).

This week’s Conservation Classic describes the first high-impact paper to signal just how bad it biodiversity could fare from climate change alone (ignoring, for the moment, synergies with other drivers of extinction).

From about the 1990s onward, conservation biologists had been accumulating a large number of case studies quantifying the extent to which species had shifted in their geographic ranges, phenology and behaviour in response to a rapidly warming planet (Parmesan & Yohe 2003). Read the rest of this entry »





Classics: Mesopredator Release

17 03 2010

© J. Short

Although popularised by Crooks & Soulé (1999), Soulé et al. (1988) first gave us the term that described how entire ecosystems can become unbalanced by a reduction of a higher trophic-level predator exerting so-called ‘top-down’ control on the abundance of species occupying lower trophic levels.

The idea had theoretical support in ecology (Wright et al. 1994; Litvaitis & Villafuerte 1996), but it was not until Soulé and colleagues described how the decline of dominant predators combines with habitat fragmentation to release top-down pressure on smaller predators, thereby increasing predation rates on prey lower down the trophic web.

Crooks & Soulé (1999) described an example where the decline in coyotes (Canis latrans) in combination with urbanisation-driven habitat fragmentation led to an increase in cat (Felis catus) densities and the subsequent decline in scrub-breeding birds. More recent examples attest to the importance of the mesopredator release phenomenon: Myers et al. (2007) described how the decline in large coastal shark species has allowed mesopredator cownose rays (Rhinoptera bonasus) to increase, leading to a reduction in commercially important shellfish densities; and Johnson et al. (2007) showed how dingoes (Canis lupus dingo) in Australia suppress populations of exotic predators such as cats and foxes, leading to more locally abundant populations of native marsupials (see previous post).

Conservation biologists have benefited from this knowledge because we’ve realised that top-order predators affect far more than their immediate prey. These examples really hit home how a fully functional community is required for ecosystem stability, so we should strive to preserve complete complements of communities, not just our favourite species.

CJA Bradshaw

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Global pollinator declines

11 03 2010

Mention anything about ecosystem services – those ecological functions arising from the interactions between species that provide some benefit (source of food/clean water, health, etc.) to humanity1 – and one of the most cited examples is pollination.

It’s really a no-brainer, hence its popularity as an example. Pollinators (mainly insects, but birds, bats and other assorted species too) don’t exist to pollinate plants; rather, their principal source of food acquisition happens to spread around the gametes of the plants they regularly visit. Evolution has favoured the dependence of species in such ways because the mutualism benefits all involved, and in some cases, this dependence has become obligate. So when the habitats that pollinators need to survive are reduced or destroyed, inevitably their population sizes decline and the plants on which they feed lose their main sources of gene-spreading.

So what? Well, about 80 % of all wild plant species require insect pollinators for fruit and seed set, and about 75 % of all human crops require pollination by insects (mostly bees). So it’s pretty frightening to consider that although our global population is at 6.8 billion and growing rapidly, our main food pollinators (bees) are declining globally (see also previous post on bee declines). Indeed, domestic honey bee stocks have declined in the USA by 59 % since 1947 and in Europe by 25 % since 1985. Scared yet?

Another thing people don’t tend to get is that a bee cannot live on rapeseed alone. Most pollinators require intact forests to complete many of their other life history requirements (breeding, shelter, etc.) and merely forage occasionally in crop lands. Cut down all the adjacent bush, and your crops will suffer accordingly.

These, and other titbits to keep you awake at night and worry about what your grandchildren might eat are highlighted in a recent review in Trends in Ecology and Evolution by Potts and colleagues entitled Global pollinator declines: trends, impacts and drivers.

What’s driving all this loss? Several things, but it’s mainly due to ‘land-use change’ (a bullshit word people use generally to mean habitat loss, fragmentation and degradation). However, invasive species competition, pathogens and parasites, and climate change (and the synergies amongst all of these) are all contributing.

It always amazes me when people ask me why biodiversity is important. Despite the overwhelming knowledge we’ve accumulated about how functioning ecosystems make the planet liveable, despite it just being plainly stupid to think that humans are somehow removed from normal biological processes, and even with such in-your-face examples of global pollinator declines and the real, extremely worrying implication for food supplies, many people just don’t seem to get it. Every tree you cut down, every molecule of carbon dioxide you release, every drop of water you waste will punish you and your family directly for generations to come. How much more self-evident can you get?

Humanity seems to have a very poorly developed sense of self-preservation.

CJA Bradshaw

1It’s amazingly arrogant and anthropocentric to think of anything in ecosystems as ‘providing benefits to humanity’. After all, we’re just another species in a complex array of species within ecosystems – we just happen to be one of the numerically dominant ones, excel at ecosystem ‘engineering’ and as far as we know, are the only (semi-) sentient of the biologicals. Although the concept of ecosystem services is, I think, an essential abstraction to place emphasis on the importance of biodiversity conservation to the biodiversity ignorant, it does rub me a little the wrong way. It’s almost ascribing some sort of illogical religious perspective that the Earth was placed in its current form for our eventual benefit. We might be a fairly new species in geological time scales, but don’t think of ecosystems as mere provisions for our well-being.

ResearchBlogging.orgPotts, S., Biesmeijer, J., Kremen, C., Neumann, P., Schweiger, O., & Kunin, W. (2010). Global pollinator declines: trends, impacts and drivers Trends in Ecology & Evolution DOI: 10.1016/j.tree.2010.01.007

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Scopus Young Researcher of the Year Awards

7 03 2010

Peter Love & Corey Bradshaw. © A. Harvey

Last week I tweeted a few times about an award I was lucky enough to win – the inaugural Scopus Young Researcher of the Year Award (in the Life Sciences and Biological Sciences category). The awards are supported by Elsevier, Scopus and Universities Australia. I just managed to get a hold of some photos from the award ceremony, so a little post is justified.

It was a fun night at Parliament House in Canberra in front of a very prestigious crowd – most of the Vice Chancellors of Australian universities were present, along with many other distinguished guests. A little daunting, but the reception was very warm indeed.

After meeting the welcoming and congratulatory Elsevier/Scopus team during a pre-dinner reception, the other category winners (Ben Eggleton, Peter Love, Dan Li and Prash Sanders) and I were then escorted to the main event at Parliament House. Bernie Hobbs of ABC Science acted as master of ceremonies, and Senator Kim Carr presented the awards with Y. S. Chi of Elsevier. Prash and I were honoured to sit at the same table with the University of Adelaide’s Vice Chancellor, Professor James McWha.

MC Bernie Hobbs. © A. Harvey

Thanks again to all those who supported my bid at the University of Adelaide and SARDI. Special thanks to Mike Young who nominated me, Barry Brook and Navjot Sodhi who provided reference letters, and K. Wertz for putting the finishing touches on the application.

The Higher Education supplement of the Australian published a few articles about the winners, and I reproduce the one describing my award and research below (article by C. Jones):

SHOOTERS in low-flying helicopters take out feral buffalo, horses and pigs that are wreaking havoc on Kakadu National Park.

There are no bullets and blood, however, as these are not real shooters and animals but silicon ones. They are cyber-entities, represented by numbers, generated in a computer model by mathematical ecologist Corey Bradshaw and his colleagues.

Land managers will be able to use the model to test scenarios in a virtual Kakadu National Park to work out the cheapest and best culling programs to limit the damage from the pests.

The mastery early in his career of mathematical modelling such as the Kakadu computer code has put Bradshaw at the forefront of conservation biology.

In naming him the Scopus young researcher of the year in the life sciences and biological sciences category, the judging panel says his modelling work has added “significant new perspectives and rigour” to his field.

Bradshaw grew up in western Canada. His interest in conservation was piqued when he ranged the Rocky Mountains of British Columbia with his father, who was a game trapper.

He later turned a knowledge of ecology that underpinned “killing things” to saving endangered species.

He obtained a bachelor of ecology from the University of Montreal in 1992. Research as part of a masters degree at the University of Alberta took him to northern Canada to study caribou. Later, he undertook a PhD in zoology at the University of Otago, Dunedin, with his research focusing on the population dynamics of fur seals.

The subjects of his fieldwork have ranged from the lowliest snails in Borneo, through penguins in Antarctica and frogs in Singapore, to Top End buffalo.

Some of his research is aimed at controlling pest species through an understanding of population dynamics. The goal of other work is to prevent extinctions of native species.

The research comes as the life sciences — once derided as the soft sciences — continue to harden up.

Like the so-called hard disciplines of physics and chemistry, biology is increasingly being structured by mathematics, and Bradshaw has been riding the wave.

The mathematics representing complex changes in populations as they boom, bust or stabilise in response to environmental factors is formidable. A paper on the Kakadu model, published recently in Methods in Ecology and Evolution, would not look out of place in a mathematics journal. It is full of equations, matrices and graphs.

“I realised the best thing I could do for my career was to get adept at mathematics,” he tells the HES. “You can’t do much of high value in conservation without it.

“The days of the natural historian walking around, casually drawing things and describing the reproductive structures of plants and animals are gone.

“We need to do the systematics as well, but the mathematics is a fundamental component of all biology now, especially ecology, because it’s such complex systems we’re dealing with.

“It’s chaos theory all the time.

“Trying to predict what an entire ecosystem is going to do gets very complicated very quickly, and mathematics is the only way to do it.”

Bradshaw’s Kakadu model divides the landscape into a grid. Equations in the model relate population size to demography for each element of the grid. Input demographic parameters include data obtained empirically through field studies: the age of individuals, the number of breeding females, and birth and mortality rates.

The program is run repeatedly, stepping forward in time, with the population size result of each run forming the initial condition of the next one.

“We can also do population viability analysis,” Bradshaw says. “We can make predictions on the probability that a population will go extinct within a certain period. It gives a window into the future.”

The work can deliver surprising results. Bradshaw’s team last year did an analysis for the federal government on the critically endangered grey nurse shark to find out the main factors in the species demise. The work showed that fishing was the biggest threat, not beach nets or a lack of protected areas, as previously suspected.

The results have influenced conservation policy, he says.

Other research suggests the Tasmanian devil, listed as endangered because of the devastating devil facial tumour disease that is ripping through populations, has recovered from big disease outbreaks before.

“We didn’t know that until we started looking at the demographic model,” Bradshaw says. “It is a scavenger, so it was probably exposed to a lot more diseases than your average animal.”

But he warns against complacency about the outbreak.

The modelling work has allowed him to make generalisations about the risk of extinction and that enables biodiversity managers to target their efforts.

“Five thousand is almost a magic number in conservation,” he says. “If you’re playing with less than that, you’re fighting a losing battle.”

The research also reveals which exotic species are likeliest to become invasive, knowledge valuable to biosecurity.

A consummate science communicator with a blog (ConservationBytes.com) and heavy community outreach schedule, Bradshaw is focusing on assessing the vulnerability of species to climate change.

And how do his models define Homo sapiens?

“They’re telling us that about 15 per cent of all the humans that ever lived are alive today,” he says. “That means that we are in the exponential phase of an invasion, much like rats on a new island or cockroaches in a new apartment.

“If we’re not careful, the very ecosystems that support our success will ensure our demise.”

CJA Bradshaw

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Begging for votes

5 03 2010

Research Blogging Awards 2010

Just a quick one to ask ConservationBytes.com readers to vote for the blog in ResearchBlogging.org‘s 2010 Research Blogging Awards.

ConservationBytes.com has been placed as a finalist in the ‘Best Blog – Conservation or Geosciences’ category.

Note – only registered bloggers themselves can vote.

CJA Bradshaw





Vodcast on killing for conservation

24 02 2010

The inaugural issue of Methods in Ecology and Evolution came out today (see first issue editorial) and I am very pleased not only that our paper (Spatially explicit spreadsheet modelling for optimizing the efficiency of reducing invasive animal density) made it into the the paper line-up (see previous ConservationBytes.com post on the paper here), we also managed to score the journal’s cover image (buffalo image shown right: Asian swamp buffalo Bubalus bubalis introduced to Australia in the early 19th Century now populate much of the tropical north and cause severe environmental disturbances to savanna and wetland ecosystems. Despite a broad-scale cull of hundreds of thousands of free-ranging buffalo occurring in the 1980s and 1990s to eradicate brucellosis and tuberculosis, the population is recovering and continuing to threaten protected areas such as Kakadu National Park. A small wild harvest of several thousand buffalo occurs each year in Arnhem Land where mustering is aided by helicopters and on-ground vehicles. The buffalo pictured are housed in temporary holding pens and then shipped for live export. Photo credit: Jesse Northfield).

I also had the opportunity to chat with Journal Coordinator, Graziella Iossa, via Skype about the paper, and they have put up a YouTube vodcast of the interview itself. You can also check it out here.

Summary: Corey Bradshaw answers what is the main idea behind his work with co-authors, “Spatially explicit spreadsheet modelling for optimising the efficiency of reducing invasive animal density”. Further, he explains how their model advances methodology in ecology and evolution and finally shows how it could be applied by wildlife manager and practitioners with basic knowledge of computer models. Their Excel-spreadsheet ‘Spatio-Temporal Animal Reduction’ (S.T.A.R.) model is designed specifically to optimise the culling strategies for feral pigs, buffalo and horses in Kakadu National Park (northern Australia), but Corey explains how their aim was to make it easy enough for anyone to use and modify it so that it could be applied to any invasive species anywhere.

Congratulations to Editor-in-Chief Rob Freckleton, Graziella and the Associate Editors for a great first issue. Other titles include:

Keep them coming!

CJA Bradshaw

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February Issue of Conservation Letters

13 02 2010

Diver at Great Barrier Reef, Australia

Hard to believe we’re already at Volume 3 – introducing the latest issue of Conservation Letters (Volume 3, Issue 1, February 2010). For full access, click here.

Note too we’ve jumped from 5 to 6 papers per issue. Congratulations to all our authors. Keep those submissions coming!

CJA Bradshaw

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ERA rankings for Conservation and Ecology journals

11 02 2010

The much-touted Excellence in Research for Australia (ERA) initiative was established in 2008 to “…assesses research quality within Australia’s higher education institutions using a combination of indicators and expert review by committees comprising experienced, internationally-recognised experts”. Following on the heels of the United Kingdom’s Research Assessment Exercise (RAE) and Australia’s previous attempt at such a ranking (the now-defunct Research Quality Framework), we will now have a system that ranks research performance and universities in this country. Overall I think it’s a good thing so that the dead-wood can lift their game or go home, but no ranking system is perfect. Some well-deserving people will be left out in the cold.

Opinions aside, I thought it would be useful to provide the ERA journal ranking categories in conservation and ecology for my readers, particularly for those in Australia. See also my Journals page for conservation journals, their impact factors and links. The ERA has ranked 20,712 unique peer-reviewed journals, with each given a single quality rating (or is not ranked). The ERA is careful to say that “A journal’s quality rating represents the overall quality of the journal. This is defined in terms of how it compares with other journals and should not be confused with its relevance or importance to a particular discipline.”.

They provide four tiers of quality rating:

  • A* =  Typically one of the best in its field or subfield in which to publish and would typically cover the entire field/subfield. Virtually all papers they publish will be of a very high quality. These are journals where most of the work is important (it will really shape the field) and where researchers boast about getting accepted. Acceptance rates would typically be low and the editorial board would be dominated by field leaders, including many from top institutions.
  • A =  The majority of papers in a Tier A journal will be of very high quality. Publishing in an A journal would enhance the author’s standing, showing they have real engagement with the global research community and that they have something to say about problems of some significance. Typical signs of an A journal are lowish acceptance rates and an editorial board which includes a reasonable fraction of well known researchers from top institutions.
  • B = Tier B covers journals with a solid, though not outstanding, reputation. Generally, in a Tier B journal, one would expect only a few papers of very high quality. They are often important outlets for the work of PhD students and early career researchers. Typical examples would be regional journals with high acceptance rates, and editorial boards that have few leading researchers from top international institutions.
  • C =  Tier C includes quality, peer reviewed, journals that do not meet the criteria of the higher tiers.

If you’re an Australian conservation ecologist, then you’d be wise to target the higher-end journals for publication over the next few years (it will affect your rank).

So, here goes:

Conservation Journals

Ecology Journals (in addition to those listed above; only A* and A)

  • A*: Annual Review of Ecology, Evolution and Systematics, Biological Reviews, Ecological Monographs, Ecology, Ecology Letters, Environment International, Fish and Fisheries, Global Ecology and Biogeography, Philosophical Transactions of the Royal Society of London: Biological Sciences, PLoS Biology, Proceedings of the Royal Society of London: Biological Sciences, The American Naturalist, The Quarterly Review of Biology
  • A: Agriculture, Ecosystems and Environment, Animal Behaviour, American Journal of Primatology, Auk, Behavioral Ecology, Behavioral Ecology and Sociobiology, BioEssays, Biology Letters, Bioscience, BMC Biology, Canadian Journal of Fisheries and Aquatic Sciences, Coral Reefs, Diversity and Distributions, Ecography, Ecological Applications, Fisheries, Freshwater Biology, Functional Ecology, International Journal of Primatology, Journal of Applied Ecology, Journal of Animal Ecology, Journal of Avian Biology, Journal of Biogeography, Journal of Ecology, Journal of Experimental Biology, Journal of Fish Biology, Journal of Mammalogy, Journal of the North American Benthological Society, Journal of Zoology, Molecular Ecology, Oecologia, Oikos, Physiological and Biochemical Zoology, Perspectives in Plant Ecology, Evolution and Systematics, Reviews in Fisheries Science, Wildlife Monographs, Zoological Journal of the Linnean Society

I’m sure I’ve missed a few, but that’ll cover most of the relevant journals. For the full, tortuous list of journals in Excel format, click here. Happy publishing!

CJA Bradshaw

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Every extra human means fewer animals

8 02 2010

© The Sun

As promised some time ago when I blogged about the imminent release of the book Conservation Biology for All (edited by Navjot Sodhi and Paul Ehrlich), I am now posting a few titbits from the book.

Today’s post is a blurb from Paul Ehrlich on the human population problem for conservation of biodiversity.

The size of the human population is approaching 7 billion people, and its most fundamental connection with conservation is simple: people compete with other animals., which unlike green plants cannot make their own food. At present Homo sapiens uses, coopts, or destroys close to half of all the food available to the rest of the animal kingdom. That means that, in essence, every human being added to the population means fewer individuals can be supported in the remaining fauna.

But human population growth does much more than simply cause a proportional decline in animal biodiversity – since as you know, we degrade nature in many ways besides competing with animals for food. Each additional person will have a disproportionate negative impact on biodiversity in general. The first farmers started farming the richest soils they could find and utilised the richest and most accessible resources first (Ehrlich & Ehrlich 2005). Now much of the soil that people first farmed has been eroded away or paved over, and agriculturalists increasingly are forced to turn to marginal land to grow more food.

Equally, deeper and poorer ore deposits must be mined and smelted today, water and petroleum must come from lower quality resources, deeper wells, or (for oil) from deep beneath the ocean and must be transported over longer distances, all at ever-greater environmental cost [my addition – this is exactly why we need to embrace the cheap, safe and carbon-free energy provided by nuclear energy].

The tasks of conservation biologists are made more difficult by human population growth, as is readily seen in the I=PAT equation (Holdren & Ehrlich 1974; Ehrlich & Ehrlich 1981). Impact (I) on biodiversity is not only a result of population size (P), but of that size multiplied by affluence (A) measured as per capita consumption, and that product multiplied by another factor (T), which summarises the technologies  and socio-political-economic arrangements to service that consumption. More people surrounding a rainforest reserve in a poor nation often means more individuals invading the reserve to gather firewood or bush meat. More poeple in a rich country may mean more off-road vehicles (ORVs) assulting the biota – especially if the ORV manufacturers are politically powerful and can succesfully fight bans on their use. As poor countries’ populations grow and segments of them become more affluent, demand rises for meat and automobiles, with domesticated animals competing with or devouring native biota, cars causing all sorts of assults on biodiversity, and both adding to climate disruption. Globally, as a growing population demands greater quantities of plastics, industrial chemicals, pesticides, fertilisers, cosmetics, and medicines, the toxification of the planet escalates, bringing frightening problems for organisms ranging from polar bears to frogs (to say nothing of people!).

In sum, population growth (along with escalating consumption and the use of environmentally malign technologies) is a major driver of the ongoing destruction of populations, species, and communities that is a salient feature of the Anthropocene. Humanity , as the dominant animal (Ehrlich & Ehrlich 2008), simply out competes other animals for the planet’s productivity, and often both plants and animals for its freshwater. While dealing with more limited problems, it therefore behoves every conservation biologist to put part of her time into restraining those drivers, including working to humanely lower [sic] birth rates until population growth stops and begins a slow decline twoard a sustainable size (Daily et al. 1994).

Incidentally, Paul Ehrlich is travelling to Adelaide this year (November 2010) for some high-profile talks and meetings. Stay tuned for coverage of the events.

CJA Bradshaw

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Salamander Longshanks – breed them out

3 02 2010

© M. Dawson

Patrick McGoohan in his role as the less-than-sentimental King Edward ‘Longshanks’ in the 1995 production of ‘Braveheart’ said it best in his references to the invocation of ius primæ noctis:

If we can’t get them out, we’ll breed them out

What a charmer.

Dabbling in molecular ecology myself over the past few years with some gel-jockey types (e.g., Dick Frankham [author of Introduction to Conservation Genetics], Melanie Lancaster, Paul Sunnucks, Yuji Isagi inter alios), I’m quite fascinated by the application of good molecular techniques in conservation biology. So when I came across the paper by Fitzpatrick and colleagues entitled Rapid spread of invasive genes into a threatened native species in PNAS, I was quite pleased.

When people usually think about invasive species, they tend to think ‘predator eating naïve native prey’ or ‘weed outcompeting native plant’. These are all big problems (e.g., think feral cats in Australia or knapweed in the USA), but what people probably don’t think about is the insidious concept of ‘genomic extinction’. This is essentially a congener invasive species breeding with a native one, thus ‘diluting’ the native’s genome until it no longer resembles its former self. A veritable case of ‘breeding them out’.

Who cares if at least some of the original genome remains? Some would argue that ‘biodiversity’ should be measured in terms of genetic diversity, not just species richness (I tend to agree), so any loss of genes is a loss of biodiversity. Perhaps more practically, hybridisation can lead to reduced fitness, like we observed in hybridised fur seals on Macquarie Island.

Fitzpatrick and colleagues measured the introgression of alleles from the deliberately introduced barred tiger salamander (Ambystoma tigrinum mavortium) into threatened California tiger salamanders (A. californiense) out from the initial introduction site. While most invasive alleles neatly stopped appearing in sampled salamanders not far from the introduction site, three invasive alleles persisted up to 100 km from the introduction site. Not only was the distance remarkable for such a small, non-dispersing beastie, the rate of introgression was much faster than would be expected by chance (60 years), suggesting selection rather than passive genetic drift. Almost none of the native alleles persisted in the face of the three super-aggressive invasive alleles.

The authors claim that the effects on native salamander fitness are complex and it would probably be premature to claim that the introgression is contributing to their threatened status, but they do raise an important management conundrum. If species identification rests on the characterisation of a specific genome, then none of the native salamanders would qualify for protection under the USA’s Endangered Species Act. They believe then that so-called ‘genetic purity’ is an impractical conservation goal, but it can be used to shield remaining ‘mostly native’ populations from further introgression.

Nice study.

CJA Bradshaw

ResearchBlogging.orgFitzpatrick, B., Johnson, J., Kump, D., Smith, J., Voss, S., & Shaffer, H. (2010). Rapid spread of invasive genes into a threatened native species Proceedings of the National Academy of Sciences DOI: 10.1073/pnas.0911802107

Lancaster, M., Bradshaw, C.J.A., Goldsworthy, S.D., & Sunnucks, P. (2007). Lower reproductive success in hybrid fur seal males indicates fitness costs to hybridization Molecular Ecology, 16 (15), 3187-3197 DOI: 10.1111/j.1365-294X.2007.03339.x

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Cartoon guide to biodiversity loss VI

26 01 2010

The continuing saga of laughing at our own lunacy (see previous cartoon entries here).

© WWF

© C. Madden

CJA Bradshaw

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Avoiding the REDD monster

22 01 2010

© Floog

A short post about a small letter that recently appeared in the latest issue of Conservation Biology – the dangers of REDD.

REDD. What is it? The acronym for ‘Reduced Emissions from Deforestation and Degradation’, it is the idea of providing financial incentives to developing countries to reduce forest clearance by paying them to keep them standing. It should work because of the avoided carbon emissions that can be gained from keeping forests intact. Hell, we certainly need it given the biodiversity crisis arising mainly from deforestation occurring in much of the (largely tropical) developing world. The idea is that someone pollutes, buys carbon credits that are then paid to some developing nation to prevent more forest clearance, and then biodiversity gets a helping hand in the process. It’s essentially carbon trading with an added bonus. Nice idea, but difficult to implement for a host of reasons that I won’t go into here (but see Miles & Kapos Science 2008 & Busch et al. 2009 Environ Res Lett).

Venter and colleagues in their letter entitled Avoiding Unintended Outcomes from REDD now warn us about another potential hazard of REDD that needs some pretty quick thinking and clever political manoeuvring to avoid.

While REDD is a good idea and I support it fully with carefully designed implementation, Venter and colleagues say that without good monitoring data and some well-planned immediate policy implementation, there could be a rush to clear even more forest area in the short term.

Essentially they argue that when the Kyoto Protocol expires in 2012, there could be a 2-year gap when forest loss would not be counted against carbon payments, and its in this window that countries might fell forests and expand agriculture before REDD takes effect (i.e., clear now and avoid later penalties).

How do we avoid this? The authors suggest that the implementation of policies to reward early efforts to reduce forest clearance and to penalise those who rush to do early clearing need to be put in place NOW. Rewards could take the form of credits, and penalties could be something like the annulment of future REDD discounts. Of course, to achieve any of this you have to know who’s doing well and who’s playing silly buggers, which means good forest monitoring. Satellite imagery analysis is probably key here.

CJA Bradshaw
ResearchBlogging.orgOscar Venter, James E.M. Watson, Erik Meijaard, William F. Laurance, & Hugh P. Possingham (2010). Avoiding Unintended Outcomes from REDD Conservation Biology, 24 (1), 5-6 DOI: 10.1111/j.1523-1739.2009.01391.x

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