Genetic Management of Fragmented Animal and Plant Populations

10 12 2016

logoThat is the title of a new textbook that will be available mid-2017.

After almost 6 years work, authors Dick Frankham, Jonathan Ballou, Katherine Ralls, Mark Eldridge, Michele Dudash, Charles Fenster, Bob Lacy & Paul Sunnucks have produced an advanced textbook/research monograph that aims to provoke a paradigm shift in the management of small, isolated population fragments of animals and plants.

One of the greatest unmet challenges in conservation biology is the genetic management of fragmented populations of threatened animal and plant species. More than a million small, isolated, population fragments of threatened species are likely suffering inbreeding depression, loss of evolutionary potential, and elevated extinction risks (genetic erosion). Re-establishing gene flow between populations is required to reverse these effects, but managers very rarely do this. On the contrary, molecular genetic methods are mainly being used to document genetic differentiation among populations, with most studies concluding that genetically differentiated populations should be managed separately (i.e., kept isolated), thereby dooming many populations to eventual extinction.

The need for a paradigm shift in genetic management of fragmented populations has been highlighted as a major issue in conservation. The rapidly advancing field of molecular genetics is continually providing new tools to measure the extent of population fragmentation and its genetic consequences. However, adequate guidance on how to use these data for effective conservation is still lacking, and many populations are going extinct principally for genetic reasons. Consequently, there is now urgent need for an authoritative textbook on the subject.

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Boreal forest on the edge of a climate-change tipping point

15 11 2016

As some know, I dabble a bit in the carbon affairs of the boreal zone, and so when writer Christine Ottery interviewed me about the topic, I felt compelled to reproduce her article here (originally published on EnergyDesk).

A view of the Waswanipi-Broadback Forest in the Abitibi region of Northern Quebec, one of the last remaining intact Boreal Forests in the province (source: EnergyDesk).

A view of the Waswanipi-Broadback forest in the Abitibi region of northern Quebec, one of the last remaining intact boreal forests in the Canadian province (source: EnergyDesk).

The boreal forest encircles the Earth around and just below the Arctic Circle like a big carbon-storing hug. It can mostly be found covering large swathes of Russia, Canada and Alaska, and some Scandinavian countries.

In fact, the boreal – sometimes called by its Russian name ‘taiga’ or ‘Great Northern Forest’ – is perhaps the biggest terrestrial carbon store in the world.

So it’s important to protect in a world where we’re aiming for 1.5 or – at worst – under two degrees celsius of global warming.

“Our capacity to limit average global warming to less than 2 degrees is already highly improbable, so every possible mechanism to reduce emissions must be employed as early as possible. Maintaining and recovering our forests is part of that solution,” Professor Corey Bradshaw, a leading researcher into boreal forests based at the University of Adelaide, told Energydesk.

It’s not that tropical rainforests aren’t important, but recent research led by Bradshaw published in Global and Planetary Change shows that that there is more carbon held in the boreal forests than previously realised.

But there’s a problem. Read the rest of this entry »

Transition from the Anthropocene to the Minicene

24 09 2016
Going, going ...

Going, going … © CJA Bradshaw

I’ve just returned from a life-changing trip to South Africa, not just because it was my first time to the continent, but also because it has redefined my perspective on the megafauna extinctions of the late Quaternary. I was there primarily to attend the University of Pretoria’s Mammal Research Institute 50thAnniversary Celebration conference.

As I reported in my last post, the poaching rates in one of the larger, best-funded national parks in southern Africa (the Kruger) are inconceivably high, such that for at least the two species of rhino there (black and white), their future persistence probability is dwindling with each passing week. African elephants are probably not far behind.

As one who has studied the megafauna extinctions in the Holarctic, Australia and South America over the last 50,000 years, the trip to Kruger was like stepping back into the Pleistocene. I’ve always dreamed of walking up to a grazing herd of mammoths, woolly rhinos or Diprotodon, but of course, that’s impossible. What is entirely possible though is driving up to a herd of 6-tonne elephants and watching them behave naturally. In the Kruger anyway, you become almost blasé about seeing yet another group of these impressive beasts as you try to get that rare glimpse of a leopard, wild dogs or sable antelope (missed the two former, but saw the latter). Read the rest of this entry »

Inexorable rise of human population pressures in Africa

31 08 2016
© Nick Brandt

© Nick Brandt

I’ve been a bit mad preparing for an upcoming conference, so I haven’t had a lot of time lately to blog about interesting developments in the conservation world. However, it struck me today that my preparations provide ideal material for a post about the future of Africa’s biodiversity.

I’ve been lucky enough to be invited to the University of Pretoria Mammal Research Unit‘s 50th Anniversary Celebration conference to be held from 12-16 September this year in Kruger National Park. Not only will this be my first time to Africa (I know — it has taken me far too long), the conference will itself be in one of the world’s best-known protected areas.

While decidedly fortunate to be invited, I am a bit intimidated by the line-up of big brains that will be attending, and of the fact that I know next to bugger all about African mammals (in a conservation science sense, of course). Still, apparently my insight as an outsider and ‘global’ thinker might be useful, so I’ve been hard at it the last few weeks planning my talk and doing some rather interesting analyses. I want to share some of these with you now beforehand, although I won’t likely give away the big prize until after I return to Australia.

I’ve been asked to talk about human population pressures on (southern) African mammal species, which might seem simple enough until you start to delve into the complexities of just how human populations affect wildlife. It’s simply from the perspective that human changes to the environment (e.g., deforestation, agricultural expansion, hunting, climate change, etc.) do cause species to dwindle and become extinct faster than they otherwise would (hence the entire field of conservation science). However, it’s another thing entirely to attempt to predict what might happen decades or centuries down the track. Read the rest of this entry »

Keeping India’s forests

9 08 2016

I’ve just returned from a short trip to the National Centre for Biological Sciences (NCBS) in Bangalore, Karnataka, one of India’s elite biological research institutes.

Panorama of a forested landscape (Savandurga monolith in the background) just south of Bangalore, Karnataka (photo: CJA Bradshaw)

Panorama of a forested landscape (Savandurga monolith in the background) just south of Bangalore, Karnataka (photo: CJA Bradshaw)

I was invited to give a series of seminars (you can see the titles here), and hopefully establish some new collaborations. My wonderful hosts, Deepa Agashe & Jayashree Ratnam, made sure I was busy meeting nearly everyone I could in ecology and evolution, and I’m happy to say that collaborations have begun. I also think NCBS will be a wonderful conduit for future students coming to Australia.

It was my first time visiting India1, and I admit that I had many preconceptions about the country that were probably unfounded. Don’t get me wrong — many of them were spot on, such as the glorious food (I particularly liked the southern India cuisine of dhosa, iddly & the various fruit-flavoured semolina concoctions), the insanity of urban traffic, the juxtaposition of extreme wealth and extreme poverty, and the politeness of Indian society (Indians have to be some of the politest people on the planet).

But where I probably was most at fault of making incorrect assumptions was regarding the state of India’s natural ecosystems, and in particular its native forests and grasslands. Read the rest of this entry »

More things stay the same, more we retrogress

20 07 2016

obrazek_1idiommmmsmmWithin six months of Abbott and the Coalition seizing power in the 2013 Australian election, decades—if not centuries—of environmental damage and retrograde policies unfolded. But this was no run-of-the-mill incompetence and neglect by government—this was an all-out attack on anything with the merest whiff of environmental protection. The travesty is well-documented, from infamously axing both the carbon-pricing scheme and climate commission, eradicating Labor’s 80% emissions-reduction target by 2050, diluting the Renewable Energy Target, refusing to commit to enforcing the Illegal Logging Prohibition Act (fortunately, this is now law), defunding the only independent legal entity available to limit environmentally destructive development (Environmental Defenders Office), to even attempting to remove the rights of environmental groups to challenge development proposals (thankfully, that failed).

The Coalition’s backward and ineffectual climate change-mitigation policies alone are evidence enough for long-term damage, but their war on the environment in general means that even the future election of a more environmentally responsible government will not undo the damage quickly, if at all. As a result of these and other nearsighted policies, Australia remains one of the highest per-capita greenhouse-gas emitters on the planet, has one of the highest per-capita water uses of any nation, leads the world in mammal extinctions, continues to deforest its already forest-poor landscape, and is a society utterly unprepared to deal with the future challenges of a degraded planet.
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One-two carbon punch of defaunation

30 04 2016

1-2 punchI’ve just read a well-planned and lateral-thinking paper in Nature Communications that I think readers of ought to appreciate. The study is a simulation of a complex ecosystem service that would be nigh impossible to examine experimentally. Being a self-diagnosed fanatic of simulation studies for just such purposes, I took particular delight in the results.

In many ways, the results of the paper by Osuri and colleagues are intuitive, but that should never be a reason to avoid empirical demonstration of a suspected phenomenon because intuition rarely equals fact. The idea itself is straightforward, but takes more than a few logical steps to describe: Read the rest of this entry »