100 papers that every ecologist should read

14 11 2017

o-SLEEP-LIBRARY-facebook

If you’re a regular reader of CB.com, you’ll be used to my year-end summaries of the influential conservation papers of that calendar year (e.g., 2016, 2015, 2014, 2013), as somewhat subjectively assessed by F1000 Prime experts. You might also recall that I wrote a post with the slightly provocative title Essential papers you’ve probably never read back in 2015 where I talked about papers that I believe at least my own students should read and appreciate by the time they’ve finished the thesis.

But this raised a much broader question — of all the thousands of papers out there that I should have read/be reading, is there a way to limit the scope and identify the really important ones with at least a hint of objectivity? And I’m certainly not referring to the essential methods papers that you have to read and understand in order to implement their recommended analysis into your own work — these are often specific to the paper you happen to be writing at the moment.

The reason this is important is that there is absolutely no way I can keep on top of my scientific reading, and not only because there are now over 1.5 million papers published across the sciences each year. If you have even the slightest interest in working across sub-disciplines or other disciplines, the challenge becomes more insurmountable. Finding the most pertinent and relevant papers to read, especially when introducing students or young researchers to the concepts, is turning into an increasingly nightmarish task. So, how do we sift through the mountain of articles out there?

It was this question that drove the genesis of our paper that came out only today in Nature Ecology and Evolution entitled ‘100 articles every ecologist should read‘. ‘Our’ in this case means me and my very good friend and brilliant colleague, Dr Franck Courchamp of Université Paris-Sud and the CNRS, with whom I spent a 6-month sabbatical back in 2015. Read the rest of this entry »





Postdoctoral position re-opened in Global Ecology

18 10 2017

women-are-better-codersI believe it is important to clarify a few things about the job advertisement that we are re-opening.

As many of you might recall, we advertised two positions in paleo-ecological modelling back in July — one in ecological networks, and the other in vegetation modelling.

We decided to do something a little unusual with the vegetation modelling position by only accepting applications from women. We did this expressly to increase the probability of attracting excellent women candidates, and to increase the number of women scientists in our lab.

I’m happy to say that we received many great applications for both positions, and whether or not it was related, most of the applicants for both positions were women (83%). As it turned out, we ended up offering the network position to a woman applicant, but we were unable to find an ideal candidate for the vegetation modelling job (i.e., the one that was originally targeting women only).

Our decision not to appoint anyone in the first round of applicants for the vegetation modelling position was clearly not related to the fact that it a woman-only position, mainly because we had so many excellent women candidates for both positions (and ended up hiring a woman for the position that was open to both genders). In other words, it seems to be a just one of those random things.

That said, we are still in need of a great vegetation modeller (or at least, someone who has the capacity to learn this knowledge), and so we have decided to re-open the announcement to both genders. However, it should go without saying that we particularly encourage women to apply.

The full details of the position, essential and desired criteria, and application process are available here (Vacancy Reference Number 17115). Note that the application closing date is 15 November 2017.

Please distribute this widely among your networks.

CJA Bradshaw





Job: Research Fellow in Palaeo-Ecological Modelling

13 04 2017

© seppo.net

I have another postdoctoral fellowship to advertise! All the details you need for applying are below.

KEY PURPOSE 

Scientific data such as fossil and archaeological records used as proxy to reconstruct past environments and biological communities (including humans) are sparse, often ambiguous or contradictory when establishing any consensus on timing or routes of initial human arrival and subsequent spread, the timing or extent of major changes in climate and other environmental perturbations, or the timing or regional pattern of biological extinctions.

The Research Fellow (Palaeo-Ecological Modelling) will assist in addressing these problems by developing state-of-the-art analytical and simulation tools to infer regional pattern of both the timing of human colonisation and megafauna extinction based on incomplete and sparse dataset, and investigating past environmental changes and human responses to identify their underlying causes and consequences on Australia’s landscapes, biodiversity and cultural history.

ORGANISATIONAL ENVIRONMENT 

The position will be based in the School of Biological Sciences in the Faculty of Science & Engineering at Flinders University. Flinders University boasts a world-class Palaeontology Research Group (PRG) and the new Global Ecology Research Laboratory that have close association with the research-intensive South Australian Museum. These research groups contribute to building a dynamic research environment that explores the continuum of environmental and evolutionary research from the ancient to modern molecular ecology and phylogeography. The School of Biological Sciences is an integrated community researching and teaching biology, and has a long history of science innovation. The appointee will join an interdisciplinary school of approximately 45 academic staff. The teaching and research activities of the School are supported by a range of technical and administrative infrastructure services.

KEY RESPONSIBILITIES

The key responsibilities and selection criteria identified for this position should be read in conjunction with the Flinders University Academic Profiles for the relevant academic classification (scroll down to Academic Profiles).

The Research Fellow (Palaeo-Ecological Modelling) will work under the direction of the Project Chief Investigator, and will be required to: Read the rest of this entry »





Subconsciously sexist?

29 06 2016

2000px-Igualtat_de_sexes.svgIt was with some consternation that I processed some recent second-hand scuttlebutt about my publishing history with respect to gender balance. I’ve always considered myself non-sexist when it comes to working with my colleagues, but as a white, middle-aged male, I’m willing to admit that perhaps subconsciously I’ve been promoting gender inequalities in science without realising that I’m doing it. As a father of a daughter, I also want to make sure the world in which she grows up isn’t as difficult as it has been for women of previous generations.

It is still an unfortunate fact that the ideal of a 50–50 gender balance in the biological sciences is far from becoming a reality; indeed, women have to be about 2.2-2.5 times more productive than their male counterparts to be as successful in securing financial support to do their work.

In fact, a 1993 study of ecologists attributed the lower (but happily, increasing) productivity and dwindling representation of women with career stage to such institutionalised injustices as: less satisfactory relationships with PhD advisors, difficulty in finding suitable mentors, lack of institutional empowerment, greater family responsibilities, lower salaries, lower job security, and lower evaluation of personal success. A follow-up study in 2012 suggested that the gap was narrowing in many of these components, but it was still far from equal. For a more comprehensive discussion of the complexity of the issues in science (see here), and in ecology in particular, see here.

Others have more recently reported no evidence for a gender effect in paper acceptance rates (Biological Conservation), and no difference in the level of perceived expertise between men and women (in long-term environmental or ecological research at 60 protected areas stratified across forests of the Asia-Pacific, African and American tropics).

Read the rest of this entry »





No evidence climate change is to blame for Australian megafauna extinctions

29 01 2016

bw spear throwingLast July I wrote about a Science paper of ours demonstrating that there was a climate-change signal in the overall extinction pattern of megafauna across the Northern Hemisphere between about 50,000 and 10,000 years ago. In that case, it didn’t have anything to do with ice ages (sorry, Blue Sky Studios); rather, it was abrupt warming periods that exacerbated the extinction pulse instigated by human hunting.

Contrary to some appallingly researched media reports, we never claimed that these extinctions arose only from warming, because the evidence is more than clear that humans were the dominant drivers across North America, Europe and northern Asia; we simply demonstrated that warming periods had a role to play too.

A cursory glance at the title of this post without appreciating the complexity of how extinctions happen might lead you to think that we’re all over the shop with the role of climate change. Nothing could be farther from the truth.

Instead, we report what the evidence actually says, instead of making up stories to suit our preconceptions.

So it is with great pleasure that I report our new paper just out in Nature Communications, led by my affable French postdoc, Dr Frédérik SaltréClimate change not to blame for late Quaternary megafauna extinctions in Australia.

Of course, it was a huge collaborative effort by a crack team of ecologists, palaeontologists, geochronologists, paleo-climatologists, archaeologists and geneticists. Only by combining the efforts of this diverse and transdisciplinary team could we have hoped to achieve what we did. Read the rest of this entry »





What makes all that biodiversity possible?

23 09 2015

tigerPredators.

You can either stop reading now because that’s the answer to the question, or you can continue and find out a little more detail.

I’ve just had an extremely pleasant experience reading John Terborgh‘s latest Perspective in PNAS. You know the kind of paper you read that (a) makes you feel smart, (b) confirms what you already think, yet informs you nonetheless, and (c) doesn’t take three days to digest? That’s one of those.

Toward a trophic theory of species diversity is not only all of those things, it’s also bloody well-written and comes at the question of ‘Why are there so many species on the planet when ecological theory can’t seem to explain how?’ with elegance, style and a lifetime of experience. I just might have to update my essential-ecology-papers list. If I had to introduce someone to 60 years of ecological theory on biodiversity, there’s no better place to start.

Read the rest of this entry »





How things have (not) changed

13 04 2015

The other night I had the pleasure of dining with the former Australian Democrats leader and senator, Dr John Coulter, at the home of Dr Paul Willis (Director of the Royal Institution of Australia). It was an enlightening evening.

While we discussed many things, the 84 year-old Dr Coulter showed me a rather amazing advert that he and several hundred other scientists, technologists and economists constructed to alert the leaders of Australia that it was heading down the wrong path. It was amazing for three reasons: (i) it was written in 1971, (ii) it was published in The Australian, and (iii) it could have, with a few modifications, been written for today’s Australia.

If you’re an Australian and have even a modicum of environmental understanding, you’ll know that The Australian is a Murdochian rag infamous for its war on science and reason. Even I have had a run-in with its outdated, consumerist and blinkered editorial board. You certainly wouldn’t find an article like Dr Coulter’s in today’s Australian.

More importantly, this 44 year-old article has a lot today that is still relevant. While the language is a little outdated (and sexist), the grammar could use a few updates, and there are some predictions that clearly never came true, it’s telling that scientists and others have been worrying about the same things for quite some time.

In reading the article (reproduced below), one could challenge the authors for being naïve about how society can survive and even prosper despite a declining ecological life-support system. As I once queried Paul Ehrlich about some of his particularly doomerist predictions from over 50 years ago, he politely pointed out that much of what he predicted did, in fact, come true. There are over 1 billion people today that are starving, and another billion or so that are malnourished; combined, this is greater than the entire world population when Paul was born.

So while we might have delayed the crises, we certainly haven’t averted them. Technology does potentially play a positive role, but it can also increase our short-term carrying capacity and buffer the system against shocks. We then tend to ignore the indirect causes of failures like wars, famines and political instability because we do not recognise the real drivers: resource scarcity and ecosystem malfunction.

Australia has yet to learn its lesson.

To Those Who Shape Australia’s Destiny

We believe that western technological society has ignored two vital facts: Read the rest of this entry »





It’s time for environmentalists to give nuclear a fair go

16 12 2014

This is an article by Barry Brook and mepublished today in The Conversation. I’m republishing it here.

Should nuclear energy be part of Australia’s (and many other countries’) future energy mix? We think so, particularly as part of a solution to reduce greenhouse gas emissions and prevent dangerous climate change.

But there are other reasons for supporting nuclear technology. In a paper recently published in Conservation Biology, we show that an energy mix including nuclear power has lowest impact on wildlife and ecosystems — which is what we need given the dire state of the world’s biodiversity.

In response, we have gathered signatures of 70 leading conservation scientists from 14 countries in an open letter asking that the environmental community:

weigh up the pros and cons of different energy sources using objective evidence and pragmatic trade-offs, rather than simply relying on idealistic perceptions of what is ‘green’.

Energy demand is rising

Modern society is a ceaseless consumer of energy, and growing demand won’t stop any time soon, even under the most optimistic energy-efficiency scenario.

Although it goes without saying that we must continue to improve energy efficiency in the developed world, the momentum of population growth and rising living standards, particularly in the developing world, means we will continue to need more energy for decades to come. No amount of wishful thinking for reduced demand will change that.

But which are the best forms of energy to supply the world, and not add to the biodiversity crisis?

Assessing our energy options

In short, the argument goes like this.

To avoid the worst ravages of climate change, we have to decarbonise fully (eliminate net carbon emissions from) the global electricity sector. Wildlife and ecosystems are threatened by this climate disruption, largely caused by fossil-fuel derived emissions.

But they are also imperilled by land transformation (i.e., habitat loss) caused in part by other energy sources, such as flooded areas (usually forests) for hydro-electricity and all the associated road development this entails, agricultural areas needed for biofuels, and large spaces needed for wind and solar farms.

Energy density of different fuels. This infographic shows the amount of energy embodied in uranium, coal, natural gas and a chemical battery, scaled to provide enough energy for a lifetime of use in the developed world. Shown are the amount of each source needed to provide same amount of energy, equivalent to 220 kWh of energy per day for 80 years.

Read the rest of this entry »





An Open Letter to Environmentalists on Nuclear Energy

15 12 2014

nuclear biodiversityProfessor Barry W. Brook, Chair of Environmental Sustainability, University of Tasmania, Australia. barry.brook@utas.edu.au

Professor Corey J.A. Bradshaw, Sir Hubert Wilkins Chair of Climate Change, The Environment Institute, The University of Adelaide, Australia. corey.bradshaw@adelaide.edu.au

An Open Letter to Environmentalists:

As conservation scientists concerned with global depletion of biodiversity and the degradation of the human life-support system this entails, we, the co-signed, support the broad conclusions drawn in the article Key role for nuclear energy in global biodiversity conservation published in Conservation Biology (Brook & Bradshaw 2014).

Brook and Bradshaw argue that the full gamut of electricity-generation sources—including nuclear power—must be deployed to replace the burning of fossil fuels, if we are to have any chance of mitigating severe climate change. They provide strong evidence for the need to accept a substantial role for advanced nuclear power systems with complete fuel recycling—as part of a range of sustainable energy technologies that also includes appropriate use of renewables, energy storage and energy efficiency. This multi-pronged strategy for sustainable energy could also be more cost-effective and spare more land for biodiversity, as well as reduce non-carbon pollution (aerosols, heavy metals).

Given the historical antagonism towards nuclear energy amongst the environmental community, we accept that this stands as a controversial position. However, much as leading climate scientists have recently advocated the development of safe, next-generation nuclear energy systems to combat global climate change (Caldeira et al. 2013), we entreat the conservation and environmental community to weigh up the pros and cons of different energy sources using objective evidence and pragmatic trade-offs, rather than simply relying on idealistic perceptions of what is ‘green’.

Although renewable energy sources like wind and solar will likely make increasing contributions to future energy production, these technology options face real-world problems of scalability, cost, material and land use, meaning that it is too risky to rely on them as the only alternatives to fossil fuels. Nuclear power—being by far the most compact and energy-dense of sources—could also make a major, and perhaps leading, contribution. As scientists, we declare that an evidence-based approach to future energy production is an essential component of securing biodiversity’s future and cannot be ignored. It is time that conservationists make their voices heard in this policy arena.

Signatories (in alphabetical order)

  1. Professor Andrew Balmford, Professor of Conservation Science, Department of Zoology, University of Cambridge, United Kingdom. apb12@cam.ac.uk
  2. Professor Andrew J. Beattie, Emeritus, Department of Biological Sciences, Macquarie University, Australia. abeattie@bio.mq.edu.au
  3. Assistant Professor David P. Bickford, Department of Biological Sciences, National University of Singapore, Singapore. dbsbdp@nus.edu.sg
  4. Professor Tim M. Blackburn, Professor of Invasion Biology, Department of Genetics, Evolution and Environment, Centre for Biodiversity and Environment Research, University College London, United Kingdom. t.blackburn@ucl.ac.uk
  5. Professor Daniel T. Blumstein, Chair, Department of Ecology and Evolutionary Biology, University of California Los Angeles, USA. marmots@ucla.edu
  6. Professor Luigi Boitani, Dipartimento di Biologia, e Biotecnologie Charles Darwin, Sapienza Università di Roma, Italy. luigi.boitani@uniroma1.it
  7. Professor Mark S. Boyce, Professor and Alberta Conservation Association Chair in Fisheries and Wildlife, Department of Biological Sciences, University of Alberta, Canada. boyce@ualberta.ca
  8. Professor David M.J.S. Bowman, Professor of Environmental Change Biology, School of Biological Sciences, University of Tasmania, Australia. david.bowman@utas.edu.au
  9. Professor Scott P. Carroll, Institute for Contemporary Evolution and Department of Entomology and Nematology, University of California Davis, USA. spcarroll@ucdavis.edu
  10. Associate Professor Phillip Cassey, School of Earth and Environmental Sciences, The University of Adelaide, Australia.
  11. Professor F. Stuart Chapin III, Professor Emeritus of Ecology, Department of Biology and Wildlife, Institute of Arctic Biology, University of Alaska Fairbanks, USA. terry.chapin@alaska.edu
  12. Professor David Choquenot, Director, Institute for Applied Ecology, University of Canberra, Australia. david.choquenot@canberra.edu.au
  13. Dr Ben Collen, Centre for Biodiversity and Environment Research, University College London, United Kingdom. b.collen@ucl.ac.uk
  14. Professor Richard T. Corlett, Director, Centre for Integrative Conservation, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, China. corlett@xtbg.org.cn
  15. Dr Franck Courchamp, Director of Research, Laboratoire Ecologie, Systématique et Evolution – UMR CNRS, Member of the European Academy of Sciences, Université Paris-Sud, France. franck.courchamp@u-psud.fr
  16. Professor Chris B. Daniels, Director, Barbara Hardy Institute, University of South Australia, Australia. chris.daniels@unisa.edu.au
  17. Professor Chris Dickman, Professor of Ecology, School of Biological Sciences, The University of Sydney, Australia. chris.dickman@sydney.edu.au
  18. Associate Professor Don Driscoll, College of Medicine, Biology and Environment, The Australian National University, Australia. don.driscoll@anu.edu.au
  19. Professor David Dudgeon, Chair Professor of Ecology and Biodiversity, School of Biological Sciences, The University of Hong Kong, Hong Kong SAR, China. ddudgeon@hku.hk
  20. Associate Professor Erle C. Ellis, Geography and Environmental Systems, University of Maryland, USA. ece@umbc.edu
  21. Dr Damien A. Fordham, School of Earth and Environmental Sciences, The University of Adelaide, Australia. damien.fordham@adelaide.edu.au
  22. Dr Eddie Game, Senior Scientist, The Nature Conservancy Worldwide Office, Australia. egame@tnc.org
  23. Professor Kevin J. Gaston, Professor of Biodiversity and Conservation, Director, Environment and Sustainability Institute, University of Exeter, United Kingdom. k.j.gaston@exeter.ac.uk
  24. Professor Dr Jaboury Ghazoul, Professor of Ecosystem Management, ETH Zürich, Institute for Terrestrial Ecosystems, Switzerland. jaboury.ghazoul@env.ethz.ch
  25. Professor Robert G. Harcourt, Department of Biological Sciences, Macquarie University, Australia. robert.harcourt@mq.edu.au
  26. Professor Susan P. Harrison, Department of Environmental Science and Policy, University of California Davis, USA. spharrison@ucdavis.edu
  27. Professor Fangliang He, Canada Research Chair in Biodiversity and Landscape Modelling, Department of Renewable Resources, University of Alberta, Canada and State Key Laboratory of Biocontrol and School of Life Sciences, Sun-yat Sen University, Guangzhou, China. fhe@ualberta.ca
  28. Professor Mark A. Hindell, Institute for Marine and Antarctic Studies, University of Tasmania, Australia. mark.hindell@utas.edu.au
  29. Professor Richard J. Hobbs, School of Plant Biology, The University of Western Australia, Australia. richard.hobbs@uwa.edu.au
  30. Professor Ove Hoegh-Guldberg, Professor and Director, Global Change Institute, The University of Queensland, Australia. oveh@uq.edu.au
  31. Professor Marcel Holyoak, Department of Environmental Science and Policy, University of California, Davis, USA. maholyoak@ucdavis.edu
  32. Professor Lesley Hughes, Distinguished Professor, Department of Biological Sciences, Macquarie University, Australia. lesley.hughes@mq.edu.au
  33. Professor Christopher N. Johnson, Department of Zoology, University of Tasmania, Australia. c.n.johnson@utas.edu.au
  34. Dr Julia P.G. Jones, Senior Lecturer in Conservation Biology, School of Environment, Natural Resources and Geography, Bangor University, United Kingdom. julia.jones@bangor.ac.uk
  35. Professor Kate E. Jones, Biodiversity Modelling Research Group, University College London, United Kingdom. kate.e.jones@ucl.ac.uk
  36. Dr Menna E. Jones, Department of Zoology, University of Tasmania, Australia. menna.jones@utas.edu.au
  37. Dr Lucas Joppa, Conservation Biologist, United Kingdom. lujoppa@microsoft.com
  38. Associate Professor Lian Pin Koh, School of Earth and Environmental Sciences, The University of Adelaide, Australia. lianpin.koh@adelaide.edu.au
  39. Professor Charles J. Krebs, Emeritus, Department of Zoology, University of British Columbia, Canada. krebs@zoology.ubc.ca
  40. Dr Robert C. Lacy, Conservation Biologist, USA. rlacy@ix.netcom.com
  41. Associate Professor Susan Laurance, Centre for Tropical Biodiversity and Climate Change, Centre for Tropical Environmental and Sustainability Studies, James Cook University, Australia. susan.laurance@jcu.edu.au
  42. Professor William F. Laurance, Distinguished Research Professor and Australian Laureate, Prince Bernhard Chair in International Nature Conservation, Centre for Tropical Environmental and Sustainability Science and School of Marine and Tropical Biology, James Cook University, Australia. bill.laurance@jcu.edu.au
  43. Professor Peter Ng Kee Lin, Department of Biological Sciences, National University of Singapore, Singapore. dbsngkl@nus.edu.sg
  44. Professor Thomas E. Lovejoy, Senior Fellow at the United Nations Foundation and University Professor in the Environmental Science and Policy department, George Mason University, USA. tlovejoy@unfoundation.org
  45. Dr Antony J Lynam, Global Conservation Programs, Wildlife Conservation Society, USA. tlynam@wcs.org
  46. Professor Anson W. Mackay, Department of Geography, University College London, United Kingdom. ans.mackay@ucl.ac.uk
  47. Professor Helene D. Marsh, College of Marine and Environmental Sciences, Centre for Tropical Water and Aquatic Ecosystem Research, James Cook University, Australia. helene.marsh@jcu.edu.au
  48. Professor Michelle Marvier, Department of Environmental Studies and Sciences, Santa Clara University, USA. mmarvier@scu.edu
  49. Professor Lord Robert M. May of Oxford OM AC Kt FRS, Department of Zoology, University of Oxford, United Kingdom. robert.may@zoo.ox.ac.uk
  50. Dr Margaret M. Mayfield, Director, The Ecology Centre, School of Biological Sciences, The University of Queensland, Australia. m.mayfield@uq.edu.au
  51. Dr Clive R. McMahon, Sydney Institute of Marine Science and Institute for Marine and Antarctic Studies, University of Tasmania, Australia. clive.mcmahon@utas.edu.au
  52. Dr Mark Meekan, Marine Biologist, Australia. m.meekan@aims.gov.au
  53. Dr Erik Meijaard, Borneo Futures Project, People and Nature Consulting, Denpasar, Bali, Indonesia. emeijaard@gmail.com
  54. Professor L. Scott Mills, Chancellor’s Faculty Excellence Program in Global Environmental Change, North Carolina State University, USA. lsmills@ncsu.edu
  55. Professor Atte Moilanen, Research Director, Conservation Decision Analysis, University of Helsinki, Finland. atte.moilanen@helsinki.fi
  56. Professor Craig Moritz, Research School of Biology, The Australian National University, Australia. craig.moritz@anu.edu.au
  57. Dr Robin Naidoo, Adjunct Professor, Institute for Resources, Environment, and Sustainability University of British Columbia, Canada. robin.naidoo@wwfus.org
  58. Professor Reed F. Noss, Provost’s Distinguished Research Professor, University of Central Florida, USA. reed.noss@ucf.edu
  59. Associate Professor Julian D. Olden, Freshwater Ecology and Conservation Lab, School of Aquatic and Fishery Sciences, University of Washington, USA. olden@uw.edu
  60. Professor Maharaj Pandit, Professor and Head, Department of Environmental Studies, University of Delhi, India. mkpandit@cismhe.org
  61. Professor Kenneth H. Pollock, Professor of Applied Ecology, Biomathematics and Statistics, Department of Applied Ecology, North Carolina State University, USA. pollock@ncsu.edu
  62. Professor Hugh P. Possingham, School of Biological Science and School of Maths and Physics, The University of Queensland, Australia. h.possingham@uq.edu.au
  63. Professor Peter H. Raven, George Engelmann Professor of Botany Emeritus, President Emeritus, Missouri Botanical Garden, Washington University in St. Louis, USA. peter.raven@mobot.org
  64. Professor David M. Richardson, Distinguished Professor and Director of the Centre for Invasion Biology, Department of Botany and Zoology, Stellenbosch University, South Africa. rich@sun.ac.za
  65. Dr Euan G. Ritchie, Senior Lecturer, Centre for Integrative Ecology, School of Life and Environmental Sciences, Deakin University, Australia. e.ritchie@deakin.edu.au
  66. Professor Terry L. Root, Senior Fellow, Stanford Woods Institute for the Environment, Stanford University, USA. troot@stanford.edu
  67. Dr Çağan H. Şekercioğlu, Assistant Professor, Biology, University of Utah, USA and Doçent 2010, Biology/Ecology, Inter-university Council (UAK) of Turkey. c.s@utah.edu
  68. Associate Professor Douglas Sheil, Department of Ecology and Natural Resource Management, Norwegian University of Life Sciences, Norway. douglas.sheil@nmbu.no
  69. Professor Richard Shine AM FAA, Professor in Evolutionary Biology, School of Biological Sciences, The University of Sydney, Australia. rick.shine@sydney.edu.au
  70. Professor William J. Sutherland, Miriam Rothschild Professor of Conservation Biology, Department of Zoology, University of Cambridge, United Kingdom. w.sutherland@zoo.cam.ac.uk
  71. Professor Chris D. Thomas, FRS, Department of Biology, University of York, United Kingdom. chris.thomas@york.ac.uk
  72. Professor Ross M. Thompson, Chair of Water Science, Institute of Applied Ecology, University of Canberra, Australia. ross.thompson@canberra.edu.au
  73. Professor Ian G. Warkentin, Environmental Science, Memorial University of Newfoundland, Canada. ian.warkentin@grenfell.mun.ca
  74. Professor Stephen E. Williams, Centre for Tropical Biodiversity and Climate Change, School of Marine and Tropical Biology, James Cook University, Australia. stephen.williams@jcu.edu.au
  75. Professor Kirk O. Winemiller, Department of Wildlife and Fisheries Sciences and Interdisciplinary Program in Ecology and Evolutionary Biology, Texas A&M University, USA. k-winemiller@tamu.edu

Note: Affiliations of signatories are for identification purposes, and do not imply that their organizations have necessarily endorsed this letter.

References

Brook, B. W., and C. J. A. Bradshaw. 2014. Key role for nuclear energy in global biodiversity conservation. Conservation Biology doi:10.1111/cobi.12433.

Caldeira, K., K., Emmanuel, J. Hansen, and T. Wigley. 2013. An Open Letter to those influencing environmental policy but opposed to nuclear power. CNN. http://edition.cnn.com/2013/11/03/world/nuclear-energy-climate-change-scientists-letter/index.html. (Accessed 14 March 2014).





Give some flair to your scientific presentation

18 11 2014

Smoko3

As the desert spring came to the great Centre Red,
Scores of sandalled folk from tin birds descend-ed.
Alice Town had been invaded,
Bearded alike and unshorn-legged.
 
They sat and stared at words and the odd trend.
Billies boiled to get them through to day’s end
They swapped bush stories that made good sense,
Trying to understand Aussie environments.
 
One bloke‘s tales caught the punters’ attention,
So this bush poet deserves special mention.
To standard rules he would not kowtow,
So his special science verse I present to you now.

If none of that made any sense, then let me help you out. At the last Ecological Society of Australia meeting in Alice Springs, I witnessed a rather unique way to give a scientific presentation – via bush poetry. Dr. Dale Nimmo of Deakin University was particularly engaging, and he agreed to have his presentation poem reproduced here. Who said scientists were boring? Honourable mention too to Simon Watson for another audience-engaging, bush-poetry seminar (but I don’t have that to reproduce here). There also might be a slidecast of Dale’s presentation coming soon. For now, please enjoy the poetic delivery of science in text.

The Old Grey Box of Heathcote Town

Dale Nimmo

Down around old Heathcote town, just east of Bendigo,
A big old grey box tree casts an eye.
The sallee fills the understory bright as sunlights glow,
As the silvereyes and thornbills flitter by.
 
This landscape, bruised and battered from 200 years of change,
Holds the secrets of a time lost somehow.
One of Jaara land, where lowan dug and dingoes howled,
The latter two, here, just distant memories now.
 
The gold rush came like bushfire, ring barked trees fell like boughs
Of the red gums scattered on the old flood plains,
That made way for sheep and cattle, while, fighting a losing battle,
rufous bettongs were never seen again.
 
When a man of English gentry, Professor Bennett was his name,
Found the woodlands to his aristocratic tastes.
Many days he’d venture in, binoculars under his chin,
He never let a single bird call go to waste.
 
While at the old St Arnaud Inn, over a couple pints of gin,
Bennet and a bloke called Radford got to talking.
Stealing horses was his game, but he’d give it all away,
To join Bennett in woodlands, bird walking

Read the rest of this entry »





Australia should have a more vibrant ecological culture

13 10 2014
Another great social event bringing ecologists together

Another great social event bringing ecologists together

I’ve always had the gut feeling that Australia punched above its weight when it comes to ecology and conservation. For years I’ve been confidently bragging to whomever might listen (mostly at conference pub sessions) that Australians have a vibrant academic and professional community of ecologists who are internationally renowned and respected. However, my bragging was entirely anecdotal and I always qualified the boast with the caveat that I hadn’t actually looked at the numbers.

Well, I finally did look at the numbers – at least superficially. It seems that for the most part, my assertion was true. I will qualify the following results with another caveat – I’ve only looked at the smallest of samples to generate this rank, so take it with a few grains of salt. Looking at the 200 most-cited ecologists in Google Scholar (with some licence as to who qualifies as an ‘ecologist’ – for example, I ditched a few medicos), I calculated the number of ecologists in that range per 100,000 people for each country. Of course, even the country of designation is somewhat fluid and imprecise – I did not know where most had received the bulk of their training and in which country they had spent most of their time, so the numbers are (again) only indicative. Excluding countries with only one highly cited ecologist in the top 200, the sorted list comes out as: Read the rest of this entry »





Attention Ecologists: Journal Ranking Survey

16 09 2014

journal rankingIn the interest of providing greater transparency when ranking the ‘quality’ of scientific journals, we are interested in collecting ecologists’ views on the relative impact of different ecology, conservation and multidisciplinary journals. If you’re a publishing ecologist, we want your personal opinion on a journal’s relative rank from this sample of 25 peer-reviewed journals. Please do not consult Impact Factors or other journal rankings to decide – just go with your ‘gut’ feeling.

We chose a sample of 25 authoritative journals in the field (listed below alphabetically). Use the drop-down menus to select a categorical rank. Make sure you’ve allocated categories 1 through to 4 at least once in the sample of 25. Category 5 (‘Other’) is optional.

The survey should take you only a few minutes to complete. Thanks for your time!





We generally ignore the big issues

11 08 2014

I’ve had a good week at Stanford University with Paul Ehrlich where we’ve been putting the final touches1 on our book. It’s been taking a while to put together, but we’re both pretty happy with the result, which should be published by The University of Chicago Press within the first quarter of 2015.

It has indeed been a pleasure and a privilege to work with one of the greatest thinkers of our age, and let me tell you that at 82, he’s still a force with which to be reckoned. While I won’t divulge much of our discussions here given they’ll appear soon-ish in the book, I did want to raise one subject that I think we all need to think about a little more.

The issue is what we, as ecologists (I’m including conservation scientists here), choose to study and contemplate in our professional life.

I’m just as guilty as most of the rest of you, but I argue that our discipline is caught in a rut of irrelevancy on the grander scale. We spend a lot of time refining the basics of what we essentially already know pretty well. While there will be an eternity of processes to understand, species to describe, and relationships to measure, can our discipline really afford to avoid the biggest issues while biodiversity (and our society included) are flushed down the drain?

Read the rest of this entry »





A fairer way to rank conservation and ecology journals in 2014

1 08 2014

Normally I just report the Thomson-Reuters ISI Web of Knowledge Impact Factors for conservation-orientated journals each year, with some commentary on the rankings of other journals that also publish conservation-related material from time to time (see my lists of the 2008200920102011 and 2012 Impact Factor rankings).

This year, however, I’m doing something different given the growing negativity towards Thomson-Reuters’ secretive behaviour (which they’ve promised this year to rectify by being more transparent) and the generally poor indication of quality that the Impact Factor represents. Although the 2013 Impact Factors have just been released (very late this year, for some reason), I’m going to compare them to the increasingly reputable Google Scholar Journal Metrics, which intuitively make more sense to me, are transparent and turn a little of the rankings dogma on its ear.

In addition to providing both the Google metric as well as the Impact Factor rankings, I’ve come up with a composite (average) rank from the two systems. I think ranks are potentially more useful than raw corrected citation metrics because you must first explicitly set your set of journals to compare. I also go one step further and modify the average ranking with a penalty term that is essentially the addition of the coefficient of variation of rank disparity between the two systems.

Read on for the results.

Read the rest of this entry »





Another 589 scientists speak out against Abbott’s war on the environment

22 07 2014

ATBC_logo_largeI’m currently in Cairns at the Association for Tropical Biology and Conservation‘s Annual Conference where scientists from all over the world have amassed for get the latest on tropical ecology and conservation. Unfortunately, all of them have arrived in an Australia different to the one they knew or admired from afar. The environmental devastation unleashed by the stupid policies of the Abbottoir government has attracted the attention and ire of some of the world’s top scientists. This is what they have to say about it (with a little help from me):

ASSOCIATION FOR TROPICAL BIOLOGY AND CONSERVATION

RESOLUTION IN SUPPORT OF STRONGER LAWS FOR CLIMATE-CHANGE MITIGATION AND ENVIRONMENTAL PROTECTION IN AUSTRALIA

Australia has many trees, amphibians, and reptiles that are unique, being found nowhere else on Earth. Northern Australia contains a disproportionate amount of this biodiversity which occurs in little developed areas, parks and reserves, indigenous titled lands, and community-managed lands.

Whilst Australia’s achievements in protecting some of its remaining native forests, wildlife and wilderness are applauded, some 6 million hectares of forest have been lost since 2000. Existing forest protection will be undermined by weak climate change legislation, and poorly regulated agricultural and urban development.

The Association for Tropical Biology and Conservation (ATBC), the world’s largest organisation dedicated to the study and conservation of tropical ecosystems, is concerned about recent changes in Australia’s environmental regulations, reduced funding for scientific and environmental research, and support for governmental and civil society organisations concerned with the environment. Read the rest of this entry »





Ecological processes depend on …

14 05 2014
© Cagan Sekercioglu

© Cagan Sekercioglu

I have been known to say (ok – I say it all the time) that ecologists should never equivocate when speaking to the public. Whether it’s in a media release, blog post, television presentation or newspaper article, just stick to ‘yes’ or ‘no’. In other words, don’t qualify your answer with some horrid statistical statement (i.e., in 95% of cases …) or say something like “… but it really depends on …”. People don’t understand uncertainty – to most people, ‘uncertainty’ means “I don’t know” or worse, “I made it all up”.

But that’s only in the movies.

In real ‘ecological’ life, things are vastly different. It’s never as straightforward as ‘yes’ or ‘no’, because ecology is complex. There are times that I forget this important aspect when testing a new hypothesis with what seem like unequivocal data, but then reality always hits.

Our latest paper is the epitome of this emergent complexity from what started out as a fairly simple question using some amazing data. What makes birds change their range1? We looked at this question from a slightly different angle than had been done before because we had access to climate data, life-history data and most importantly, actual range change data. It’s that latter titbit that is typically missing from studies aiming to understand what drives species toward a particular fate; whether it’s a species distribution model predicting the future habitat suitability of some species as a function of climate change, or the past dynamics of some species related to its life history pace, most often the combined dynamics are missing. Read the rest of this entry »





Upcoming conservation, ecology and modelling conferences

7 03 2014

IMG_34271Our lab just put together a handy list of upcoming ecology, conservation and modelling conferences around the world in 2014. Others might also find it useful. Some of the abstract submission deadlines have already passed, but it still might be useful to know what’s on the immediate horizon if attendance only is an option.

Conference Dates Venue Call for Abstracts Deadline
Queensland Ornithological Conference 31 May Brisbane, Australia Open 10 Mar
Spatial Ecology and Conservation 17 Jun Birmingham, UK Closed 21 Feb
Asia-Pacific Coral Reef Symposium 23 Jun Taiwan Closed 5 Feb
International Statistical Ecology Conference 1 Jul Montpellier, France Closed 13 Jan
International Institute of Fisheries Economics & Trade 2014 7 Jul Brisbane Closed 31 Jan
World Conference on Natural Resource Modeling 8 Jul Vilnius, Lithuania Open 31 Mar
Society for Conservation Biology Oceania Section 9 Jul Suva, Fiji Open 7 Mar Read the rest of this entry »




More species = more resilience

8 01 2014

reef fishWhile still ostensibly ‘on leave’ (side note: Does any scientist really ever take a proper holiday? Perhaps a subject for a future blog post), I cannot resist the temptation to blog about our lab’s latest paper that just came online today. In particular, I am particularly proud of Dr Camille Mellin, lead author of the study and all-round kick-arse quantitative ecologist, who has outdone herself on this one.

Today’s subject is one I’ve touched on before, but to my knowledge, the relationship between ‘diversity’ (simply put, ‘more species’) and ecosystem resilience (i.e., resisting extinction) has never been demonstrated so elegantly. Not only is the study elegant (admission: I am a co-author and therefore my opinion is likely to be biased toward the positive), it demonstrates the biodiversity-stability hypothesis in a natural setting (not experimental) over a range of thousands of kilometres. Finally, there’s an interesting little twist at the end demonstrating yet again that ecology is more complex than rocket science.

Despite a legacy of debate, the so-called diversity-stability hypothesis is now a widely used rule of thumb, and its even implicit in most conservation planning tools (i.e., set aside areas with more species because we assume more is better). Why should ‘more’ be ‘better’? Well, when a lot of species are interacting and competing in an ecosystem, the ‘average’ interactions that any one species experiences are likely to be weaker than in a simpler, less diverse system. When there are a lot of different niches occupied by different species, we also expect different responses to environmental fluctuations among the community, meaning that some species inherently do better than others depending on the specific disturbance. Species-rich systems also tend to have more of what we call ‘functional redundancy‘, meaning that if one species providing an essential ecosystem function (e.g., like predation) goes extinct, there’s another, similar species ready to take its place. Read the rest of this entry »





Hate journal impact factors? Try Google rankings instead

18 11 2013

pecking orderA lot of people hate journal impact factors (IF). The hatred arises for many reasons, some of which are logical. For example, Thomson Reuters ISI Web of Knowledge® keeps the process fairly opaque, so it’s sometimes difficult to tell if journals are fairly ranked. Others hate IF because it does not adequately rank papers within or among sub disciplines. Still others hate the idea that citations should have anything to do with science quality (debatable, in my view). Whatever your reason though, IF are more or less here to stay.

Yes, individual scientists shouldn’t be ranked based only on the IF of the journals in which they publish; there are decent alternatives such as the h-index (which can grow even after you die), or even better, the m-index (or m-quotient; think of the latter as a rate of citation accumulation). Others would rather ditch the whole citation thing altogether and measure some element of ‘impact’, although that elusive little beast has yet to be captured and applied objectively.

So just in case you haven’t already seen it, Google has recently put its journal-ranking hat in the ring with its journal metrics. Having firmly wrested the cumbersome (and expensive) personal citation accumulators from ISI and Scopus (for example) with their very popular (and free!) Google Scholar (which, as I’ve said before, all researchers should set-up and make available), they now seem poised to do the same for journal rankings.

So for your viewing and arguing pleasure, here are the ‘top’ 20 journals in Biodiversity and Conservation Biology according to Google’s h5-index (the h-index for articles published in that journal in the last 5 complete years; it is the largest number h such that h articles published in 2008-2012 have at least h citations each):

Read the rest of this entry »





Biogeography comes of age

22 08 2013

penguin biogeographyThis week has been all about biogeography for me. While I wouldn’t call myself a ‘biogeographer’, I certainly do apply a lot of the discipline’s techniques.

This week I’m attending the 2013 Association of Ecology’s (INTECOL) and British Ecological Society’s joint Congress of Ecology in London, and I have purposefully sought out more of the biogeographical talks than pretty much anything else because the speakers were engaging and the topics fascinating. As it happens, even my own presentation had a strong biogeographical flavour this year.

Although the species-area relationship (SAR) is only one small aspect of biogeography, I’ve been slightly amazed that after more than 50 years since MacArthur & Wilson’s famous book, our discipline is still obsessed with SAR.

I’ve blogged about SAR issues before – what makes it so engaging and controversial is that SAR is the principal tool to estimate overall extinction rates, even though it is perhaps one of the bluntest tools in the ecological toolbox. I suppose its popularity stems from its superficial simplicity – as the area of an (classically oceanic) island increases, so too does the total number of species it can hold. The controversies surrounding such as basic relationship centre on describing the rate of that species richness increase with area – in other words, just how nonlinear the SAR itself is.

Even a cursory understanding of maths reveals the importance of estimating this curve correctly. As the area of an ‘island’ (habitat fragment) decreases due to human disturbance, estimating how many species end up going extinct as a result depends entirely on the shape of the SAR. Get the SAR wrong, and you can over- or under-estimate the extinction rate. This was the crux of the palaver over Fangliang He (not attending INTECOL) & Stephen Hubbell’s (attending INTECOL) paper in Nature in 2011.

The first real engagement of SAR happened with John Harte’s maximum entropy talk in the process macroecology session on Tuesday. What was notable to me was his adamant claim that the power-law form of SAR should never be used, despite its commonness in the literature. I took this with a grain of salt because I know all about how messy area-richness data can be, and why one needs to consider alternate models (see an example here). But then yesterday I listened to one of the greats of biogeography – Robert Whittaker – who said pretty much the complete opposite of Harte’s contention. Whittaker showed results from one of his papers last year that the power law was in fact the most commonly supported SAR among many datasets (granted, there was substantial variability in overall model performance). My conclusion remains firm – make sure you use multiple models for each individual dataset and try to infer the SAR from model-averaging. Read the rest of this entry »








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