I can’t believe I’ve now done twenty of these – another 6 biodiversity cartoons while I’m travelling (see full stock of previous ‘Cartoon guide to biodiversity loss’ compendia here).
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I can’t believe I’ve now done twenty of these – another 6 biodiversity cartoons while I’m travelling (see full stock of previous ‘Cartoon guide to biodiversity loss’ compendia here).
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The people at the new open-access journal F1000Research (a Faculty of 1000 publication) have asked me to help them announce their new deal for ecologists – no processing fees until 2014! Might have to give it a go myself…
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F1000Research covers all areas of life sciences, but we know that different fields each have their own unique characteristics, and some features of our journal are of particular interest to certain disciplines.
For the coming months, one area we’ll be focussing on is ecology. To encourage ecologists to try F1000Research, we’re waiving the article processing charge for all first submissions of an ecology paper until 2014. (Use code ECOL15 when submitting).
”F1000Research is an ideal venue for publishing an ecology paper. Research, which includes full datasets, is openly available and its speed of publication and transparency in reviews makes it a refreshing alternative to traditional publishing.” Gary Luck, Institute for Land, Water and Society, Charles Sturt University, Australia
Three good reasons to send your ecology papers to F1000Research:
1. Quickly reach a wide audience
All articles are fully open access and include all data, and with our post-publication peer review model, your article can be online within a week (find out more about our speedy publication process). Read the rest of this entry »
My recently finished PhD student, Ana Sequeira, has not only just had a superb paper just accepted in Global Change Biology, she’s recently been offered (and accepted) a postdoctoral position based at the University of Western Australia‘s Oceans Institute (in partnership with AIMS and CSIRO). As any supervisor, I’m certainly pleased when a student completes her PhD, but my pride as an academic papa truly soars when she gets her first job. Well done, Ana. This post by Ana is about her latest paper.
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Following our previous whale shark work (see here, here, here, here, here, here and here), especially the recent review where we inferred global connectivity and suggest possible pathways for their migration, we have now gone a step further and modelled the habitat suitability for the species at at global scale. This paper sets a nice scene regarding current habitat suitability, which also demonstrates the potential connectivity pathways we hypothesised previously. But the paper goes much further; we extend our predictions to a future scenario for 2070 when water temperatures are expected to increase on average by 2 °C.

Global predictions of current seasonal habitat suitability for whale sharks. Black triangles indicate known aggregation locations. Solid line delineates areas where habitat suitability > 0.1 was predicted.
Regarding the current range of whale sharks (i.e., its currently suitable habitat), we already know that whale sharks span latitudes between about 35 º North to South. We also know that this geographical range has been exceeded on several occasions. What we did not know was whether conditions were suitable enough for whale sharks to cross from the Indian Ocean to the Atlantic Ocean – in other words, whether they could travel between ocean basins south of South Africa. Our global model results demonstrate that suitable habitat in this region does exist at least during the summer, thus supporting our hypotheses regarding global connectivity!
It’s true that the extensive dataset we used (30 years’ worth of whale shark sightings collected by tuna purse seiners in the three major oceans – data provided by the IRD, IOTC and SPC) has many caveats (as do all opportunistically collected data), but we went to great trouble to deal with them in this paper (you can request a copy here or access it directly here). And the overall result: the current global habitat suitability for whale sharks does agree well with current locations of whale shark occurrence, with the exception of the Eastern Pacific for where we did not have enough data to validate. Read the rest of this entry »

© F. Fish http://goo.gl/rWG8fI
Another post from Alejandro Frid (a modified excerpt from a chapter of his forthcoming book).
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I fall in love easy. Must be my Latino upbringing. Whatever it is, I have no choice on the matter. So for five years and counting, I have been passionate about lingcod (Ophiodon elongatus) and rockfish (Sebastes spp.), upper- and mid-level predatory fishes on rocky reefs of the Northeast Pacific.
Lingcod are beautiful and fierce. Rockfish are cosmic. Both taste mighty good and—surprise, surprise—have been overfished to smithereens throughout much of their range. Howe Sound, my field site near Vancouver, British Columbia, is no exception, although new protective legislation might be starting to give them some slack.
Our dive surveys1 and earlier studies, in combination, have pieced together a story of ecosystem change. In the Howe Sound of today, lingcod rarely exceed body lengths of 80 cm. But up to 30 years ago, when overfishing had yet to inflict the full extent of its current damage, lingcod with lengths of 90 to 100 cm had been common in the area. There is nothing unique about this; most fisheries target the biggest individuals, ultimately reducing maximum body size within each species of predatory fish.
As predators shrink, the vibrant tension of predation risk slips away. The mechanism of change has a lot to do with mouth size. Predatory fishes swallow prey whole, usually head or tail first, so it is impossible for them to eat prey bigger than the width and height of their open jaws. And bigger fishes have bigger jaws, which makes them capable not only of consuming larger prey, but also of scaring bigger prey into using antipredator behaviours, such as hiding in rocky crevices. As predators shrink, big prey enter a size refuge and only small prey remain at risk, which can alter trophic cascades and other indirect species interactions. Read the rest of this entry »
The title of this post is deliberately intended to be provocative, but stay with me – I do have an important point to make.
I’m sure most every scientist in almost any discipline feels that her or his particular knowledge quest is “the most important”. Admittedly, there are some branches of science that are more applied than others – I have yet to be convinced, for example, that string theory has an immediate human application, whereas medical science certainly does provide answers to useful questions regarding human health. But the passion for one’s own particular science discipline likely engenders a sort of tunnel vision about its intrinsic importance.
So it comes down to how one defines ‘important’. I’m not advocating in any way that application or practicality should be the only yardstick to ascertain importance. I think superficially impractical, ‘blue-skies’ theoretical endeavours are essential precursors to all so-called applied sciences. I’ll even go so far as to say that there is fundamentally no such thing as a completely unapplied science discipline or question. As I’ve said many times before, ‘science’ is a brick wall of evidence, where individual studies increase the strength of the wall to a point where we can call it a ‘theory’. Occasionally a study comes along and smashes the wall (paradigm shift), at which point we begin to build a new one. Read the rest of this entry »
I was only a little tacker in 1978, and as any little tacker, I was blissfully unaware that I had just lived through a world-changing event. Just like that blissfully ignorant child, most people have no idea how important that year was.
It was around that year that humanity exceeded the planet’s capacity to sustain itself in perpetuity1. As I’ve just discovered today, it was also the same year that the per-capita Genuine Progress Indicator (GPI) peaked.
Now for a little detour and disclaimer before I explain all that. I’m not an economist, but I have a dabbled with the odd economic concept and bolted-on economic sub-routine in a few models I’ve written. Some would argue that conservation (i.e., the quest and methods needed to conserve biowealth) is almost entirely an economic pursuit, for economics is the discipline that attempts to explain (and modify) human behaviour. I tend to agree insofar as we now know enough on the biological side regarding how species become threatened and go extinct, and what kind of things we need to do to avoid losing more of the life-support system provided by biodiversity. Being completely practical about it, one could even argue that the biology part of conservation biology is complete – we should all now re-train as economists. While that notion probably represents a little hyperbole, it does demonstrate that economics is an essential endeavour in the fight to conserve our home.
Almost everyone has heard of ‘GDP’ – the Gross Domestic Product – as an indicator of economic ‘performance’, although most people have little idea what it actually measures (I’m including businesspeople and politicians here). GDP is merely the sum of marketed economic activity, which is only one small facet of the economy. For example, growing a tomato and preparing a salad for your family with it is not included, yet buying a frozen meal in the supermarket is. Even an oil spill increases GDP via increased expenditures associated with clean-up and remediation, when clearly it is not a ‘good’ thing for the economy on the whole because of the lost opportunities it causes in other sectors. Read the rest of this entry »
On the continuing theme of the demise of laws designed to protect Australian biodiversity (see here, here and here), I’m reproducing our latest Nature Correspondence on the issue. I know this might be slightly dodgy to do so, but given that it’s only a Correspondence, I don’t think I’ll get in too much trouble. Besides, it’s too important an issue to hide away behind paywalls.
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Policy and legislative changes by Australia’s state governments are eroding the vital protection of the country’s unique biodiversity.
Reserves are being opened up to ecologically disruptive activities, such as grazing by domestic livestock, logging, mining, recreational hunting and fishing, and commercial development. Protected habitats on private and leasehold land are imperilled too. Queensland and Victoria, for example, are relaxing hard-won laws that limit vegetation clearance on private land, further accelerating the loss of regional biodiversity.
Collectively, these actions increase the pressure on biodiversity conservation in protected areas, many of which are already showing biodiversity loss (for example, the Kakadu National Park in northern Australia). Ecological connectivity is being lost, which will hamper the dispersal of species and their ability to respond to climate-change effects. Read the rest of this entry »
It’s the time of year that scientists love to hate – the latest (2012) journal ranking have been released by ISI Web of Knowledge. Many people despise this system, despite its major role in driving publishing trends.
I’ve previously listed the 2008, 2009, 2010 and 2011 IF for major conservation and ecology journals. As before, I’ve included the previous year’s IF alongside the latest values to see how journals have improved or worsened (but take note – journals increase their IF on average anyway merely by the fact that publication frequency is increasing, so small jumps aren’t necessarily meaningful; I suspect that declines are therefore more telling).
A corker of an idea, and post, from Diogo Veríssimo.
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I don’t like biodiversity. I like beef lasagna, I like the British museum and I like everything Jules Verne ever wrote. When it comes to biodiversity, it’s different. I think about it all the time, try to be close to it and suffer emotional distress when I think of it going irretrievably away. This is LOVE.
Understanding how to get this passion across effectively has always been one of my main goals. That is why my research has focused on the links between marketing and conservation. But recently I started feeling a bit more empowered to take this mission seriously, and all thanks to the Facebook page I fucking love Science. This page became an internet sensation amassing more than 5 million fans and engaging frequently over 4 million users in any given week. Forget the New York Times and National Geographic, this is the real deal.
So I wondered, why can’t I do the same for biodiversity? The idea lingered in my head until I read a recent paper by McCallum and Bury on Google search patterns, which shows how even during the United Nations Decade on Biodiversity we are failing to mainstream biodiversity and its associated issues. If fact, people seem to be less interested. Whatever we are doing is clearly not working. So why not give this concept a try? And so I fucking love Biodiversity (IFLB) was born.
Following our The Conversation article a few weeks ago about the rapid demise of national parks in Australia, a few of us (me, Euan Ritchie & Emma Johnston) wrote a follow-up piece on the Australia’s national park misnomer (published simultaneously on The Conversation).
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Australia boasts over 500 national parks covering 28 million hectares of land, or about 3.6% of Australia. You could be forgiven for thinking we’re doing well in the biodiversity-conservation game.
But did you know that of those more than 500 national parks, only six are managed by the Commonwealth Government? For marine parks, it’s a little more: 61 of the 130-plus are managed primarily by the Commonwealth. This means that the majority of our important biodiversity refuges are managed exclusively by state and territory governments. In other words, our national parks aren’t “national” at all.
In a world of perfect governance, this wouldn’t matter. But we’re seeing the rapid “relaxation” of laws designed to protect our “national” and marine parks by many state governments. Would making all of them truly national do more to conserve biodiversity?
One silly decision resulting in a major ecosystem disturbance in a national park can take decades if not hundreds of years to heal. Ecosystems are complex interactions of millions of species that take a long time to evolve – they cannot be easily repaired once the damage is done.
Almost overnight, Queensland, New South Wales and Victoria have rolled back nearly two centuries of park protection. What’s surprising here is that many of our conservation gains in the last few decades (for example, the Natural Heritage Trust, the National Reserve System, the Environment Protection and Biodiversity Conservation Act and a national marine reserve network) originated from Coalition policies. Read the rest of this entry »
On the way to work yesterday I was listening to ABC Radio National‘s Life Matters program hosted by Natasha Mitchell about how school children are now apparently being given so much positive praise and encouragement that they can no longer handle failure. Poor, wee dears. Maybe that’s why we have such a high attrition rate once they get up to postgraduate level, because that’s when they REALLY experience failure.
Jokes and whinges aside, there is a hard truth in that message that applies to all scientists, and especially the early-career ones. I’m talking about having your paper rejected from a journal.
Even the terms we use to describe the peer-review gauntlet appear designed to instil fear and inadequacy: reject or accept. I don’t know how many times I’ve seen a PhD student’s face figuratively melt off the skull as they shuffle into my office to show me the journal’s rejection letter (now just usually forwarded in an email accompanied by implied stooped shoulders – is there an emoticon for that?). As I’ve mentioned before, we scientists can be real bastards to each other, and it comes out in spades during peer review.
While neophytes tend to take these hits the hardest, I want to impart a little wisdom from some of my very well-established and successful colleagues. Rejection should be viewed as an asset, not a mark of failure. Let me explain. Read the rest of this entry »
Here are 6 more biodiversity cartoons illustrating through humour the sad state of the natural world (see full stock of previous ‘Cartoon guide to biodiversity loss’ compendia here).
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Another soul-searching post from Alejandro Frid.
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Confession time. This is going to be delicate, and might even ruffle some big feathers. Still, all of us need to talk about it. In fact, I want to trigger a wide conversation on the flaws and merits of what I did.
Back in March of this year I saw a posting for a job with the Smithsonian Conservation Biology Institute (SCBI) seeking a ‘conservation biologist to provide expert advice in the design and implementation of a Biodiversity Monitoring and Assessment Program (BMAP) in northern British Columbia, Canada’. The job sounded cool and important. I was suited for it, knew northern British Columbia well, and loved the idea of working there.
But there was a catch. The job was focused on the local impacts of fossil fuel infrastructure while dissociating itself from the climate impacts of burning that fuel, and involved collaborating with the fossil fuel company. According to the posting, this was not a new thing for the Smithsonian:
Guided by the principles of the Convention on Biological Diversity, SCBI works with a selected group of oil and gas companies since 1996 to develop models designed to achieve conservation and sustainable development objectives while also protecting and conserving biodiversity, and maintaining vital ecosystem services that benefit both humans and wildlife.
Given that climate change already is diminishing global biodiversity and hampering the ecosystem services on which we all depend, the logic seemed inconsistent to me. But there was little time to ponder it. The application deadline had just passed and my soft-money position with the Vancouver Aquarium Marine Science Centre was fizzling out. So I applied, hastily, figuring that I would deal with the issue later, if they ever got back to me. Read the rest of this entry »
It’s interesting when a semi-random tweet by a colleague ends up mobilising a small army of scientists to get pissed off enough to co-write an article. Euan Ritchie of Deakin University started it off, and quickly recruited me, Mick McCarthy, David Watson, Ian Lunt, Hugh Possingham, Bill Laurance and Emma Johnston to put together the article. It’s a hugely important topic, so I hope it generates a lot of discussion and finally, some bloody action to stop the rapid destruction of this country’s national parks system.
Note: Published simultaneously on The Conversation.
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It’s make or break time for Australia’s national parks.
National parks on land and in the ocean are dying a death of a thousand cuts, in the form of bullets, hooks, hotels, logging concessions and grazing licences. It’s been an extraordinary last few months, with various governments in eastern states proposing new uses for these critically important areas.
Australia’s first “National Park”, established in 1879, was akin to a glorified country club. Now called the “Royal National Park” on the outskirts of Sydney, it was created as a recreational escape for Sydney-siders, with ornamental plantations, a zoo, race courses, artillery ranges, livestock paddocks, deer farms, logging leases and mines.
Australians since realised that national parks should focus on protecting the species and natural landscapes they contain. However, we are now in danger of regressing to the misguided ideals of the 19th Century.
In Victoria, new rules will allow developers to build hotels and other ventures in national parks. In New South Wales, legislation has been introduced to allow recreational shooting in national parks, and there is pressure to log these areas too. Read the rest of this entry »
We sent out this media release the other day, but it had pretty poor pick-up (are people sick of the carbon price wars?). Anyway, I thought it prudent to reprint here on CB.com.
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Will Australia’s biodiversity benefit from the new carbon economy designed to reduce greenhouse gas emissions? Or will bio-‘perversities’ win the day?
“Cautious optimism” was the conclusion of Professor Corey Bradshaw, Director of Ecological Modelling at the University of Adelaide’s Environment Institute. He is lead author of a new paper published in the journal of Biological Conservation which reviewed the likely consequences of a carbon economy on conservation of Australian biodiversity.
“In most circumstances these two very important goals for Australia’s future – greenhouse gas emissions reduction and biodiversity conservation – are not mutually exclusive and could even boost each other,” Professor Bradshaw says.
“There are, however, many potential negative biodiversity outcomes if land management is not done with biodiversity in mind from the outset.”
The paper was contributed to by 30 Australian scientists from different backgrounds. They reviewed six areas where Australia’s Carbon Farming Initiative could have the greatest impact on biodiversity: environmental plantings; policies and practices to deal with native regrowth; fire management; agricultural practices; and feral animal control.
“The largest biodiversity ‘bang for our buck’ is likely to come from tree plantings,” says Professor Bradshaw. “But there are some potential and frightening ‘bioperversities’ as well. For example, we need to be careful not to plant just the fastest-growing, simplest and non-native species only to ‘farm’ carbon.
“Carbon plantings will only have real biodiversity value if they comprise appropriate native tree species and provide suitable habitats and resources for valued fauna. Such plantings could however risk severely altering local hydrology and reducing water availability.”
Professor Bradshaw says carefully managing regrowth of once-cleared areas could also produce a large carbon-sequestration and biodiversity benefit simultaneously. And carbon price-based modifications to agriculture that would benefit biodiversity included reductions in tillage frequency, livestock densities and fertiliser use, and retention and regeneration of native shrubs. Read the rest of this entry »
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| Study vehicle, a group of vicuñas and a guanaco in San Guillermo National Park (San Juan, Argentina) [courtesy of Marco Escudero]. Guanacos and vicuñas are native to South America, and are the ancestors of domesticated llamas and alpacas – which are exploited for their meat, milk and wool. Both species form monotypic genera. They have discontinuous distributions in Argentina, Bolivia, Chile and Peru, with introduced populations in Paraguay (guanaco) and Ecuador (vicuña). Population estimates are > 500,000 (guanaco) and > 300,000 (vicuña), the latter restricted to high-altitude ecosystems. They are ‘Least Concern’ for the IUCN but, given their low population growth rates (fertility = 1 offspring/female/yr), guanacos and vicuñas are targeted by conservation programs in all their native countries. |
Many of us might have stumbled twice on the same stone, yet learnt to be wary of future situations of similar risk. Likewise, wild animals can be predisposed to flee when faced with already known predators (or threats in general). The type and magnitude of their evasive response depends on predator distance, speed and body size (1). Regardless, prey need to assess predation risk in a matter of seconds (or even shorter than that), i.e., balancing the benefits and costs of fleeing.
The benefits all boil down to survival, but the costs might include moving away from offspring, loss of access to fresh and abundant food, or spending precious metabolic energy (2). The methods ecologists use to study animal flight behaviour in the wild are rife with nuisances (3), yet they represent a tool for quantifying wildlife stress resulting from a variety of human activities.
Equipped with our modern technological kit (weapons, vehicles, GPS, etc.), humans behave like genuine predators and can trigger the range of flight behaviours displayed by their potential prey. In that context, Emiliano Donadio and Steve Burskirk (4) studied flight behaviour of guanacos (Lama guanicoe) and vicuñas (Vicugna vicugna) in the Argentinean open plains (‘llanos’). They monitored 2 protected areas under weak surveillance and subject to illegal hunting: the Laguna Brava Provincial Reserve and the San Guillermo Biosphere Reserve (treatment = H); and one area free of hunting and only exposed to guided visits with strict entry/exit times: the San Guillermo National Park (treatment = NH). The ecologists did 3 transects per study area. When they encountered a group of camelids, they classified three types of flight behaviour (alert without fleeing, walking away, galloping away), and measured flight time (between vehicle detection and initiation of flight behaviour) and flight distance (between the vehicle and the individuals when initiating flight behaviour). Read the rest of this entry »
If science is the best way to reduce subjectivity when asking a question of how something works, then an inherently essential aspect of this is getting your message across to as many people and as clearly as possible. And as CB readers will know, I’m all about ‘getting the message out’.
As such, when asked by a stranger about what I do, I often respond ‘writer’, because perhaps next to maths, I spend most of my time writing. I tend to argue that without good oral and (especially) written communication skills, even the most brilliant scientist is functionally useless to the rest of society.
So being a writer means that focussing on what some would describe as mundane – spelling, grammar, writing style and clarity – is an essential preoccupation. I’ve written about grammatical and style issues before (see here and here), and in the spirit of providing tips to young scientists out there, here’s another suggestion.
Please, please, please use your own voice.
I’m talking about that archaic style of zombie writing that has plagued scientific writing since its inception – the passive voice.
1. It’s almost always hazy – and not just in the cities. The particulate matter pollution makes even sunny days appear like it’s about to rain. To add insult to injury, almost every advertisement with anything to do with ‘outside’ pictures a pristinely blue sky and copious sunshine, without the hint of grey. When stepping off the aeroplane, the distinct taste of tar hits the back of your throat.
2. You can’t drink the water from the tap – not anywhere. In fact, you can’t even brush your teeth with it or risk getting some nasty intestinal parasite.
3. You can’t plant trees fast enough because the frequency of landslips kills hundreds of people yearly.
4. While catching a taxi from the airport, the driver plays a continuous loop of birds singing, because most residents never hear those sounds.
5. You have an economy in over-drive, and yet you still think of yourself as ‘developing’.
6. Emerging infectious disease jumping from livestock to humans is now a near-regular occurrence, with new and weird diseases that threaten to become human pandemics and mutating with alarming speed popping up everywhere. Read the rest of this entry »